RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 ALKBH3Q96Q83 286 aaPredicted RBP12.17□□□□□ -0.46
CLPB-209ENST00000538039 IER2Q9BTL4 223 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 CRLF2Q9HC73 371 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 DSPP15924 2871 aaKnown RBP12.17□□□□□ -0.46
CLPB-209ENST00000538039 ARHGAP21Q5T5U3 1957 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 PROB1E7EW31 1015 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 CA11O75493 328 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 PCOLCEQ15113 449 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 MYPOPQ86VE0 399 aaPredicted RBP12.17□□□□□ -0.46
CLPB-209ENST00000538039 CARFQ8N187 725 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 NAT6Q93015 286 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 BOD1Q96IK1 185 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 FGF23Q9GZV9 251 aaPredicted RBP12.17□□□□□ -0.46
CLPB-209ENST00000538039 METTL1Q9UBP6 276 aaKnown RBP12.17□□□□□ -0.46
CLPB-209ENST00000538039 ST3GAL6Q9Y274 331 aa12.17□□□□□ -0.46
CLPB-209ENST00000538039 DIDO1Q9BTC0 2240 aaKnown RBP12.17□□□□□ -0.46
CLPB-209ENST00000538039 H0YL77 283 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 CXCL1P09341 107 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 GNRHRP30968 328 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 CEBPGP53567 150 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 ULBP2Q9BZM5 246 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 SLC35B3Q9H1N7 401 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 TINAGQ9UJW2 476 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 BCAT2O15382 392 aaPredicted RBP12.16□□□□□ -0.46
CLPB-209ENST00000538039 LCATP04180 440 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 ATP6V0CP27449 155 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 GLP1RP43220 463 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 ZNF133P52736 654 aaPredicted RBP12.16□□□□□ -0.46
CLPB-209ENST00000538039 KMT5CQ86Y97 462 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 ZNF251Q9BRH9 671 aa12.16□□□□□ -0.46
CLPB-209ENST00000538039 FAM186AA6NE01 2351 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 IGKV1D-13A0A0B4J2D9 117 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 NPIPA2E9PIF3 369 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 NPIPA3F8WFD2 350 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 IGHV2-70P01814 119 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 SMIM6P0DI80 62 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 IGKV1-13P0DP09 117 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 ZNF32P17041 273 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 IGFBP7Q16270 282 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 LRTM2Q8N967 370 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 LUZP4Q9P127 313 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 CST7O76096 145 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 UMODP07911 640 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 FAM27BQ5VT28 67 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
CLPB-209ENST00000538039 ZNF565Q8N9K5 539 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 MOB3AQ96BX8 217 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 CCDC74BQ96LY2 380 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 TUBA4BQ9H853 241 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 PARPBPQ9NWS1 579 aa12.15□□□□□ -0.46
CLPB-209ENST00000538039 TLX3O43711 291 aaPredicted RBP12.14□□□□□ -0.47
CLPB-209ENST00000538039 IGHV3-9P01782 118 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 PSG4Q00888 419 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 GFI1BQ5VTD9 330 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 MRPL14Q6P1L8 145 aaKnown RBP12.14□□□□□ -0.47
CLPB-209ENST00000538039 ASCL4Q6XD76 172 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 TMEM217Q8N7C4 229 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 URGCP-MRPS24S4R325 110 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 HSPB6O14558 160 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 ST8SIA3O43173 380 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 NRASP01111 189 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 SRFP11831 508 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 LIFP15018 202 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 DUSP1P28562 367 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 GUCA1AP43080 201 aaPredicted RBP12.14□□□□□ -0.47
CLPB-209ENST00000538039 RND3P61587 244 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 RAB30Q15771 203 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 FAM189A2Q15884 450 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 HEPN1Q6WQI6 88 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 OSR2Q8N2R0 312 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 LINC00469Q8N7U9 141 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 SLC7A10Q9NS82 523 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 LIPGQ9Y5X9 500 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
CLPB-209ENST00000538039 NDUFS6O75380 124 aaKnown RBP12.14□□□□□ -0.47
CLPB-209ENST00000538039 SCTP09683 121 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 RFPL3SP0C7P2 107 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 EDN3P14138 238 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 ERVFRD-1P60508 538 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 HERPUD1Q15011 391 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
CLPB-209ENST00000538039 PLPPR1Q8TBJ4 325 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 ANGPTL4Q9BY76 406 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 KCNJ16Q9NPI9 418 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 HS3ST3B1Q9Y662 390 aa12.14□□□□□ -0.47
CLPB-209ENST00000538039 HSD17B6O14756 317 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 SSSCA1O60232 199 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 JMJD7P0C870 316 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 CCL2P13500 99 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 DTYMKP23919 212 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 RBP2P50120 134 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 AFF3P51826 1226 aaKnown RBP12.13□□□□□ -0.47
CLPB-209ENST00000538039 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
CLPB-209ENST00000538039 CLDN15P56746 228 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 PPA1Q15181 289 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 TMEM42Q69YG0 159 aa12.13□□□□□ -0.47
CLPB-209ENST00000538039 ZNF818PQ6ZRF7 136 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms