RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PPT1P50897 306 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 ZNF616Q08AN1 781 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 AVPI1Q5T686 147 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 ETV3LQ6ZN32 361 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 SLC35G3Q8N808 338 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 CPNE4Q96A23 557 aaPredicted RBP12.35□□□□□ -0.43
USP44-203ENST00000537435 SPSB4Q96A44 273 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 TECTBQ96PL2 329 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 GINS3Q9BRX5 216 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 CACFD1Q9UGQ2 172 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 NCKAP5O14513 1909 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 PCP4L1A6NKN8 68 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 SPP1P10451 314 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 SNCAP37840 140 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 NHLH2Q02577 135 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 IGSF11Q5DX21 431 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 CDCP2Q5VXM1 449 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 C1QTNF5Q9BXJ0 243 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 TNRC6BQ9UPQ9 1833 aaKnown RBP12.35□□□□□ -0.43
USP44-203ENST00000537435 SHANK1Q9Y566 2161 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 KPTNQ9Y664 436 aa12.35□□□□□ -0.43
USP44-203ENST00000537435 ZNHIT1O43257 154 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 CER1O95813 267 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 FHITP49789 147 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 TRIM61Q5EBN2 209 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 PRDM14Q9GZV8 571 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 C3orf85A0A1B0GTC6 90 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 PDGFBP01127 241 aaPredicted RBP12.34□□□□□ -0.43
USP44-203ENST00000537435 GLAP06280 429 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 CAMLGP49069 296 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 CYB561P49447 251 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 HOXA1P49639 335 aaPredicted RBP12.34□□□□□ -0.43
USP44-203ENST00000537435 GFRA1P56159 465 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 ZFP82Q8N141 532 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 C2CD4CQ8TF44 421 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 IER2Q9BTL4 223 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 BIN3Q9NQY0 253 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 LUZP4Q9P127 313 aa12.34□□□□□ -0.43
USP44-203ENST00000537435 NOSIPQ9Y314 301 aaKnown RBP12.34□□□□□ -0.43
USP44-203ENST00000537435 COLCA2A8K830 154 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 RPL36A-HNRNPH2H7BZ11 118 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 MPPED1O15442 326 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 C1QL1O75973 258 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 TDGF1P13385 188 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 CCNOP22674 350 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 GUK1Q16774 197 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 C9orf135Q5VTT2 229 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 UBALD2Q8IYN6 164 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 HSD17B11Q8NBQ5 300 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 OR56B2PQ8NGI1 322 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 HPSE2Q8WWQ2 592 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 EXTL1Q92935 676 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 PAPOLGQ9BWT3 736 aaKnown RBP12.33□□□□□ -0.44
USP44-203ENST00000537435 ESRP2Q9H6T0 727 aaKnown RBP12.33□□□□□ -0.44
USP44-203ENST00000537435 SMCO4Q9NRQ5 59 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 MRPL33O75394 65 aaKnown RBP12.33□□□□□ -0.44
USP44-203ENST00000537435 PRH1P02810 166 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 BCL3P20749 454 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 PMELP40967 661 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 AKR1C3P42330 323 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 GNMTQ14749 295 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 DCAF12Q5T6F0 453 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 PEAR1Q5VY43 1037 aaPredicted RBP12.33□□□□□ -0.44
USP44-203ENST00000537435 COMMD1Q8N668 190 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 SLAMF9Q96A28 289 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 TMEM45BQ96B21 275 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 C19orf12Q9NSK7 152 aa12.33□□□□□ -0.44
USP44-203ENST00000537435 MRPS18CQ9Y3D5 142 aaKnown RBP12.33□□□□□ -0.44
USP44-203ENST00000537435 A0A096LPE4 126 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 NKX2-6A6NCS4 301 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 B4E171 279 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 GNRHRP30968 328 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 TSPAN7P41732 249 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 KCNJ3P48549 501 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 ASCL1P50553 236 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 FOXO1Q12778 655 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 SPINK14Q6IE38 97 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 COLCA1Q6ZS62 124 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 DPPA2Q7Z7J5 298 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 CT55Q8WUE5 264 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 SLC7A10Q9NS82 523 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 TRDCB7Z8K6 153 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 CCL2P13500 99 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 UCP2P55851 309 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
USP44-203ENST00000537435 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
USP44-203ENST00000537435 SRYQ05066 204 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 HMGN3Q15651 99 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 SPIN3Q5JUX0 258 aa12.32□□□□□ -0.44
USP44-203ENST00000537435 TIPARPQ7Z3E1 657 aaKnown RBP12.32□□□□□ -0.44
USP44-203ENST00000537435 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms