RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 RPS11P62280 158 aaKnown RBP eCLIP11.61□□□□□ -0.55
UBE3B-206ENST00000536398 ACSM1Q08AH1 577 aa11.61□□□□□ -0.55
UBE3B-206ENST00000536398 DMKNQ6E0U4 476 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-206ENST00000536398 Q6P435 159 aa11.61□□□□□ -0.55
UBE3B-206ENST00000536398 AHSA2Q719I0 299 aa11.61□□□□□ -0.55
UBE3B-206ENST00000536398 OR52N1Q8NH53 320 aa11.61□□□□□ -0.55
UBE3B-206ENST00000536398 HAVCR2Q8TDQ0 301 aa11.61□□□□□ -0.55
UBE3B-206ENST00000536398 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
UBE3B-206ENST00000536398 HEXA-AS1Q9H8Q6 139 aa11.61□□□□□ -0.55
UBE3B-206ENST00000536398 CHCHD3Q9NX63 227 aaKnown RBP11.61□□□□□ -0.55
UBE3B-206ENST00000536398 ZNF281Q9Y2X9 895 aa11.61□□□□□ -0.55
UBE3B-206ENST00000536398 A0A0G2JK05 382 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 PNMA8CA0A1B0GUJ8 204 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 EFCAB10A6NFE3 127 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 SH2D1BO14796 132 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 ZNF728P0DKX0 622 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 AQP4P55087 323 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 RAG2P55895 527 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 SRSF4Q08170 494 aaKnown RBP11.6□□□□□ -0.55
UBE3B-206ENST00000536398 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 LDLRAD2Q5SZI1 272 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 LHFPL4Q7Z7J7 247 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 SAXO1Q8IYX7 474 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 DYNAPQ8N1N2 210 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 ZSCAN4Q8NAM6 433 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-206ENST00000536398 OR10K1Q8NGX5 313 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 SGCDQ92629 289 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 TMEM106AQ96A25 262 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 SMIM19Q96E16 107 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 PGLYRP3Q96LB9 341 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 NR1H4Q96RI1 486 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-206ENST00000536398 DPAGT1Q9H3H5 408 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 EXOSC4Q9NPD3 245 aaKnown RBP11.6□□□□□ -0.55
UBE3B-206ENST00000536398 PLCXD1Q9NUJ7 323 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 CNOT2Q9NZN8 540 aaKnown RBP11.6□□□□□ -0.55
UBE3B-206ENST00000536398 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
UBE3B-206ENST00000536398 TRBV5-5A0A0J9YX44 114 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 MAGEA13PA6NCF6 341 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 MGST3O14880 152 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 MMP23AO75900 390 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 IGHV1-8P0DP01 117 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 OR3A4PP47883 348 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 MEF2CQ06413 473 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-206ENST00000536398 GABPB1Q06547 395 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-206ENST00000536398 MIDNQ504T8 468 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 BAIAP2L2Q6UXY1 529 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 STX19Q8N4C7 294 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 BEND2Q8NDZ0 799 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 TNFAIP8L1Q8WVP5 186 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 DYRK2Q92630 601 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 ZNF714Q96N38 554 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 GPER1Q99527 375 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 PPA2Q9H2U2 334 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 FKBP14Q9NWM8 211 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 ING3Q9NXR8 418 aa11.59□□□□□ -0.55
UBE3B-206ENST00000536398 hCG_1809904A0A1W2PP81 198 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 A0A1W2PPK0 400 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 A0A1W2PR64 198 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 A0A1W2PRV1 198 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 hADV38S2A0JD32 116 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 H3BUX3 64 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 SLC33A1O00400 549 aaPredicted RBP11.58□□□□□ -0.56
UBE3B-206ENST00000536398 DEGS1O15121 323 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 MAGEB3O15480 346 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 CDRT1O95170 752 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 NDUFA7O95182 113 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 ZNF44P15621 663 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 LMO1P25800 156 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 GLIPR1P48060 266 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 P2RX3P56373 397 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 AESQ08117 197 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 LY6EQ16553 131 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 PXT1Q8NFP0 134 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 COQ2Q96H96 371 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 SSX3Q99909 188 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 FAM192AQ9GZU8 254 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 MEGF9Q9H1U4 602 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 VCXQ9H320 206 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 ZNF581Q9P0T4 197 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 VPREB3Q9UKI3 123 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 ING4Q9UNL4 249 aa11.58□□□□□ -0.56
UBE3B-206ENST00000536398 TRAV8-7A0A075B6U6 113 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 POM121CA8CG34 1229 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 PTGES3LE9PB15 166 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 HSPB6O14558 160 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 ALDOBP05062 364 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 ARG1P05089 322 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 CD2P06729 351 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 IGFBP3P17936 291 aaPredicted RBP11.57□□□□□ -0.56
UBE3B-206ENST00000536398 PTGFRP43088 359 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 MTNR1BP49286 362 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 KRTAP10-3P60369 221 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 MED21Q13503 144 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 PIGYQ3MUY2 71 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 PLA1AQ53H76 456 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 C6orf141Q5SZD1 244 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 ELP2Q6IA86 826 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 SHISA2Q6UWI4 295 aa11.57□□□□□ -0.56
UBE3B-206ENST00000536398 ASCL4Q6XD76 172 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms