RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 JUNBP17275 347 aaPredicted RBP11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 KIR2DS4P43632 304 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 P2RX3P56373 397 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 RAB40BQ12829 278 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 LDLRAD2Q5SZI1 272 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 LPCAT4Q643R3 524 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 KLHDC1Q8N7A1 406 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 OR11H6Q8NGC7 330 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 OR52I1Q8NGK6 324 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 OR5AK2Q8NH90 309 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 TSEN15Q8WW01 171 aaKnown RBP11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 MALSU1Q96EH3 234 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 NPFFR1Q9GZQ6 430 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 COMMD4Q9H0A8 199 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 FOXJ3Q9UPW0 622 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 DHDHQ9UQ10 334 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 RPL36Q9Y3U8 105 aaKnown RBP11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 PCDHGB5Q9Y5G0 923 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 HILPDAQ9Y5L2 63 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 SESN1Q9Y6P5 492 aa11.55□□□□□ -0.56
RTN3P1-201ENST00000536295 IGHV2-26A0A0B4J1V2 119 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 TMEM212A6NML5 194 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 VGLL3A8MV65 326 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 MMP23AO75900 390 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 MT-ND2P03891 347 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 TMEM225BP0DP42 221 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 VSIG10L2P0DP72 767 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 ZNF44P15621 663 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 EFNB2P52799 333 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 GBX2P52951 348 aaPredicted RBP11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 HERPUD1Q15011 391 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 SMN1Q16637 294 aaKnown RBP11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 C2orf68Q2NKX9 166 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 CCBE1Q6UXH8 406 aaPredicted RBP11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 LIAT1Q6ZQX7 453 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 Q6ZTK2 550 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 SERPINA12Q8IW75 414 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 OR5D14Q8NGL3 314 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 NDNFQ8TB73 568 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 RPS4Y2Q8TD47 263 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 APH1BQ8WW43 257 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 ZNF649Q9BS31 505 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 TMEM133Q9H2Q1 129 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 RANBP3Q9H6Z4 567 aaPredicted RBP11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 INPP5EQ9NRR6 644 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 TCF19Q9Y242 345 aa11.54□□□□□ -0.56
RTN3P1-201ENST00000536295 TRGV10A0A0A0MS01 117 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 MEGF11A6BM72 1044 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 FAM172BPA6NC97 362 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 SULT1B1O43704 296 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 CSF1P09603 554 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 CCDC159P0C7I6 412 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 ERP29P30040 261 aaKnown RBP11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 GLIPR1P48060 266 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 SOX2P48431 317 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 GTF2A1P52655 376 aaPredicted RBP11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 SLC34A1Q06495 639 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 AESQ08117 197 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 IL18R1Q13478 541 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 HABP2Q14520 560 aaPredicted RBP11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 KISS1Q15726 138 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 KLHL22Q53GT1 634 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 PRAMEF5Q5TYX0 476 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 BAIAP2L2Q6UXY1 529 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 ZNF555Q8NEP9 628 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 CLEC7AQ9BXN2 247 aa11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 UBE2J1Q9Y385 318 aaPredicted RBP11.53□□□□□ -0.56
RTN3P1-201ENST00000536295 DSCAML1Q8TD84 2053 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 A0A0G2JK05 382 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 A6NDX4 124 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 F2RL2O00254 374 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 DEGS1O15121 323 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 ZP1P60852 638 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 MRPL28Q13084 256 aaKnown RBP11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 ATXN7L3Q14CW9 347 aaPredicted RBP11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 PDLIM3Q53GG5 364 aaPredicted RBP11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 ZNF691Q5VV52 312 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 C11orf88Q6PI97 169 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 SATL1Q86VE3 508 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 SAXO1Q8IYX7 474 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 PARP16Q8N5Y8 322 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 STMN2Q93045 179 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 NR1H4Q96RI1 486 aaPredicted RBP11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 GAL3ST2Q9H3Q3 398 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 SMPD3Q9NY59 655 aaPredicted RBP11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 WNK1Q9H4A3 2382 aa11.52□□□□□ -0.57
RTN3P1-201ENST00000536295 VWFP04275 2813 aa11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 FUOMA2VDF0 154 aa11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 SLC33A1O00400 549 aaPredicted RBP11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 HSPB6O14558 160 aa11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 CLIC3O95833 236 aa11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 RPSAP08865 295 aaKnown RBP11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 LIMS3P0CW19 117 aa11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 LIMS4P0CW20 117 aa11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 RAB3AP20336 220 aa11.51□□□□□ -0.57
RTN3P1-201ENST00000536295 CDK2P24941 298 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms