RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 KLF5Q13887 457 aaPredicted RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 COTL1Q14019 142 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 RCAN2Q14206 197 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 RAB11BQ15907 218 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 ZIC1Q15915 447 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SSX1Q16384 188 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 HAGHQ16775 308 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CYP51A1Q16850 503 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 LINC00303Q3SY05 128 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 LRRC37A5PQ49AS3 106 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CCSMST1Q4G0I0 132 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 RFTN2Q52LD8 501 aaPredicted RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 EIPR1Q53HC9 387 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SPIN4Q56A73 249 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 TMEM255AQ5JRV8 349 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 AVPI1Q5T686 147 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 HACD4Q5VWC8 232 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 OR2A2Q6IF42 318 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 FAHD1Q6P587 224 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 PLET1Q6UQ28 207 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 TMPRSS11AQ6ZMR5 421 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 Q6ZRG5 221 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 FAM92BQ6ZTR7 304 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SLC16A13Q7RTY0 426 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 FAM122BQ7Z309 247 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CEACAM19Q7Z692 300 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 ANKRD37Q7Z713 158 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 TMEM179BQ7Z7N9 219 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 MOB3BQ86TA1 216 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 MRPL52Q86TS9 123 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 CYP4Z1Q86W10 505 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 GID4Q8IVV7 300 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 TMEM123Q8N131 208 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SPICQ8N5J4 248 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 LINC01555Q8NAE3 123 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 ZNF555Q8NEP9 628 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NFAM1Q8NET5 270 aaPredicted RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 OR4D5Q8NGN0 318 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 OR5AR1Q8NGP9 310 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 OR1L4Q8NGR5 311 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 OR10G6Q8NH81 332 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CLHC1Q8NHS4 586 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 EXOSC8Q96B26 276 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 TMEM159Q96B96 161 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CXorf40BQ96DE9 158 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NARS2Q96I59 477 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 OR2A7Q96R45 310 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 HBEGFQ99075 208 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 TEAD3Q99594 435 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 GPR22Q99680 433 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 KCNS3Q9BQ31 491 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 UTP23Q9BRU9 249 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 C20orf24Q9BUV8 137 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 DDA1Q9BW61 102 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 C1QTNF6Q9BXI9 259 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 BEX2Q9BXY8 128 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 GABARAPL3Q9BY60 117 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 PRRG3Q9BZD7 231 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NKX6-2Q9C056 277 aaPredicted RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 OR51E2Q9H255 320 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 OR51V1Q9H2C8 321 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 ELOVL6Q9H5J4 265 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 TUBA4BQ9H853 241 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 RAB18Q9NP72 206 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 MIEF1Q9NQG6 463 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 EXOSC3Q9NQT5 275 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 NUDT15Q9NV35 164 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 IMPAD1Q9NX62 359 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SCN3BQ9NY72 215 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 GPR83Q9NYM4 423 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 THYN1Q9P016 225 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 GHRLQ9UBU3 117 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 MLXQ9UH92 298 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 FBXL3Q9UKT7 428 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NPIPA1Q9UND3 350 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SSR3Q9UNL2 185 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CACNA1DQ01668 2161 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 COL12A1Q99715 3063 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 PTPN13Q12923 2485 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 MED12LQ86YW9 2145 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SPTA1P02549 2419 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 INTS1Q8N201 2190 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 RP1L1Q8IWN7 2480 aaPredicted RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 SPTBN1Q01082 2364 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 TRGV8A0A0C4DH27 118 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TRBV11-1A0A0K0K1C0 115 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TMEM218A2RU14 115 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TLCD2A6NGC4 264 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 FRG2CA6NGY1 282 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 FBLL1A6NHQ2 334 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 GABRR3A8MPY1 467 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 MCRIP1C9JLW8 97 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 G3V2T6 193 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 M0R233 179 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 UBDO15205 165 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TCAPO15273 167 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 MLNRO43193 412 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 LYRM1O43325 122 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 ZNF749O43361 778 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 EIF4E2O60573 245 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms