RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CLDN20	P56880	219 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FNDC7	Q5VTL7	733 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ETV3L	Q6ZN32	361 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	BAP18	Q8IXM2	172 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FAHD2A	Q96GK7	314 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC52A3	Q9NQ40	469 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SEC14L6	B5MCN3	397 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TRDC	B7Z8K6	153 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	GREM1	O60565	184 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CSF2RB	P32927	897 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	LINC00303	Q3SY05	128 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SHISA5	Q8N114	240 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	WDR31	Q8NA23	367 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PPP1R1C	Q8WVI7	109 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZNF385A	Q96PM9	386 aa	Known RBP	13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	C1QA	P02745	245 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FOXL2	P58012	376 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	MPV17L	Q2QL34	196 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OR8D4	Q8NGM9	314 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	DTX4	Q9Y2E6	619 aa		13.83	□□□□□ -0.2
NCAPD3-213	ENST00000534532	KCNMB1	Q16558	191 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	LRRTM1	Q86UE6	522 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OR5AP2	Q8NGF4	316 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZNRF4	Q8WWF5	429 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CCL8	P80075	99 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OR2J1	Q9GZK6	312 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	IL17B	Q9UHF5	180 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ACP1	P24666	158 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ADAM5	Q6NVV9	412 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	MRGPRG	Q86SM5	289 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PECR	Q9BY49	303 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	GPR27	Q9NS67	375 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532		V9GYS6	101 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CTAG2	O75638	210 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CD37	P11049	281 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ERVFRD-1	P60508	538 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FAM162B	Q5T6X4	162 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	DGAT2L6	Q6ZPD8	337 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SMIM7	Q9BQ49	75 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CTDSP1	Q9GZU7	261 aa		13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	COL11A2	P13942	1736 aa	Predicted RBP	13.82	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SEC16A	O15027	2179 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	IFNL4	K9M1U5	179 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	HOXB1	P14653	301 aa	Predicted RBP	13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OR1L4	Q8NGR5	311 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	DYNLRB2	Q8TF09	96 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	GNG7	O60262	68 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ADRA2A	P08913	450 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SPP1	P10451	314 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RPL31	P62899	125 aa	Known RBP	13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	WDR61	Q9GZS3	305 aa	Known RBP	13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	WDR13	Q9H1Z4	485 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CACNG5	Q9UF02	275 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC45A2	Q9UMX9	530 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ADAMTSL1	Q8N6G6	1762 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	BCL3	P20749	454 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TMPRSS13	Q9BYE2	586 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	UMAD1	C9J7I0	102 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TSTD3	H0UI37	97 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	NAAA	Q02083	359 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC38A11	Q08AI6	406 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZNF596	Q8TC21	504 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RNF133	Q8WVZ7	376 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	NTNG2	Q96CW9	530 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PIMREG	Q9BSJ6	248 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC25A32	Q9H2D1	315 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	NAA60	Q9H7X0	242 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PIPOX	Q9P0Z9	390 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	MTFP1	Q9UDX5	166 aa		13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.81	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OPN1MW	P04001	364 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OPN1MW2	P0DN77	364 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OPN1MW3	P0DN78	364 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	GSX2	Q9BZM3	304 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	BTN1A1	Q13410	526 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FAM27B	Q5VT28	67 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZNF519	Q8TB69	540 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FLYWCH2	Q96CP2	140 aa	Known RBP	13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	RNF115	Q9Y4L5	304 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TRBV23-1	A0A0A0MS06	115 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	UPK3A	O75631	287 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZP4	Q12836	540 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	ZNF239	Q16600	458 aa	Known RBP	13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	TMEM231	Q9H6L2	316 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	URGCP-MRPS24	S4R325	110 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	T	O15178	435 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SLC31A2	O15432	143 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PMEL	P40967	661 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	PAFAH1B2	P68402	229 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	FAM3A	P98173	230 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	HLX	Q14774	488 aa	Predicted RBP	13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	LINC00596	Q86U02	117 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	SFXN3	Q9BWM7	321 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	OR51I2	Q9H344	312 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	CROCC	Q5TZA2	2017 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	UCP2	P55851	309 aa		13.8	□□□□□ -0.2
NCAPD3-213	ENST00000534532	R3HDM4	Q96D70	268 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms