RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 IGHV3-13P01766 116 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 IGHV2-70P01814 119 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 PTGFRP43088 359 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 ATP1B3P54709 279 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 CEACAM21Q3KPI0 293 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 TMEM155Q4W5P6 130 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 CRIP3Q6Q6R5 217 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 LHFPL2Q6ZUX7 228 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 SAMD12Q8N8I0 201 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR8G5Q8NG78 346 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR5A2Q8NGI9 324 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 LGALS14Q8TCE9 139 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR5P3Q8WZ94 311 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 BORCS8Q96FH0 119 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 RNF170Q96K19 258 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 CEP19Q96LK0 163 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 WDFY2Q96P53 400 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 GPER1Q99527 375 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 FGF23Q9GZV9 251 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 TMEM100Q9NV29 134 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 NECAP2Q9NVZ3 263 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 SPATA2Q9UM82 520 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 ING4Q9UNL4 249 aa9.37□□□□□ -0.91
TRAPPC4-213ENST00000533149 IGKV1-27A0A075B6S5 117 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 PLSCR5A0PG75 271 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 PQLC2LA1A4F0 135 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 FAM25AB3EWG3 89 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 FAM25CB3EWG5 89 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 FAM25GB3EWG6 89 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 ZNF732B4DXR9 585 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 SPRY3O43610 288 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 IGHV1-46P01743 117 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 ARSBP15848 533 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 ELK1P19419 428 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR3A4PP47883 348 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 RBP2P50120 134 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 MMP15P51511 669 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 SEC61A1P61619 476 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 PLA2G7Q13093 441 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 GLIPR1L1Q6UWM5 242 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 CCDC190Q86UF4 302 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 LAX1Q8IWV1 398 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 TNFAIP8L1Q8WVP5 186 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 SSMEM1Q8WWF3 244 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 HPSE2Q8WWQ2 592 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 S100ZQ8WXG8 99 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 MICU1Q9BPX6 476 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 AKIP1Q9NQ31 210 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 ADAM30Q9UKF2 790 aa9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 MRPS28Q9Y2Q9 187 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-213ENST00000533149 TMEM272A0A1B0GTI8 110 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 H0YL77 283 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 APOA1P02647 267 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 EIF4EP06730 217 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 MELTFP08582 738 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 TMEM225BP0DP42 221 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 CPT2P23786 658 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 RANBP1P43487 201 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 POU3F4P49335 361 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 GPM6AP51674 278 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 SCAND1P57086 179 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR8G1Q15617 311 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 AWAT2Q6E213 333 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR10K2Q6IF99 312 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 BRD3OSQ6XYD6 125 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 Q6ZR03 302 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 LRRC28Q86X40 367 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 CMTM4Q8IZR5 234 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 MFSD4AQ8N468 514 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 DTX3Q8N9I9 347 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 PNLDC1Q8NA58 520 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR5D18Q8NGL1 313 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR13G1Q8NGZ3 307 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 ITPKCQ96DU7 683 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 CPNE2Q96FN4 548 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 DIRAS2Q96HU8 199 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 CMTM3Q96MX0 182 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 WWC2-AS2Q96NR7 200 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 SLC22A4Q9H015 551 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 CYSLTR2Q9NS75 346 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 NOP16Q9Y3C1 178 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 ETV7Q9Y603 341 aa9.35□□□□□ -0.91
TRAPPC4-213ENST00000533149 FABP12A6NFH5 140 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 OR5B21A6NL26 309 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 F5H0A9 414 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 LDLRAD4O15165 306 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 BPNT1O95861 308 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ADH4P08319 380 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 UBBP0CG47 229 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ETV6P41212 452 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 EFNB2P52799 333 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 CAPZA1P52907 286 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ZP1P60852 638 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 GNG3P63215 75 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 PDZK1IP1Q13113 114 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ZNF846Q147U1 533 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 UBE2NLQ5JXB2 153 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 GPR157Q5UAW9 335 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 CNIH2Q6PI25 160 aa9.34□□□□□ -0.91
TRAPPC4-213ENST00000533149 ASCL4Q6XD76 172 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms