RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SUMF1Q8NBK3 374 aa6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 KCNG3Q8TAE7 436 aa6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 DNASE2BQ8WZ79 361 aa6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 PSMF1Q92530 271 aa6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF385AQ96PM9 386 aaKnown RBP6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 ZPBPQ9BS86 351 aa6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 NUDT9Q9BW91 350 aa6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 CNTD2Q9H8S5 307 aa6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 AKIRIN1Q9H9L7 192 aaPredicted RBP6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 SEMA5BQ9P283 1151 aa6.02□□□□□ -1.45
TGFBR3-209ENST00000532540 A0A1B0GWA3 101 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 SCDO00767 359 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 NKX2-1P43699 371 aaPredicted RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 CCL11P51671 97 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 EFNB2P52799 333 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 MPV17LQ2QL34 196 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 NUFIP2Q7Z417 695 aaKnown RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 SHISA5Q8N114 240 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ADAD2Q8NCV1 583 aaKnown RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 SAP25Q8TEE9 199 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ARHGDIGQ99819 225 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PLK3Q9H4B4 646 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 SRD5A3Q9H8P0 318 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PELI2Q9HAT8 420 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 COPS7AQ9UBW8 275 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 HDGFL3Q9Y3E1 203 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ENTPD2Q9Y5L3 495 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 TICRRQ7Z2Z1 1910 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ANAPC1Q9H1A4 1944 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ICE1Q9Y2F5 2266 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 A0A1W2PQM1 296 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PPIHO43447 177 aaKnown RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 DOK2O60496 412 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 RAMP1O60894 148 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 LCATP04180 440 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 IRF2P14316 349 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 GNB3P16520 340 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ADRA2CP18825 462 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 GALNSP34059 522 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PPP1CCP36873 323 aaKnown RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 P2RY1P47900 373 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 RAC1P63000 192 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ELOBQ15370 118 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 C1orf194Q5T5A4 169 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 THSD4Q6ZMP0 1018 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 MRPL52Q86TS9 123 aaKnown RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 OR2L13Q8N349 312 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 LHX4Q969G2 390 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 OR8B4Q96RC9 309 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 MS4A8Q9BY19 250 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 TBL1XR1Q9BZK7 514 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PCED1AQ9H1Q7 454 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 FKRPQ9H9S5 495 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ADAM29Q9UKF5 820 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 SIGLEC7Q9Y286 467 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 WIPI2Q9Y4P8 454 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PIGBOS1A0A0B4J2F0 54 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 EFSO43281 561 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 RAD51DO75771 328 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 HSPB1P04792 205 aaKnown RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 FTH1P19P0C7X4 201 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 DANCRP0C864 163 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 HKR1P10072 659 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 CD99P14209 185 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 KIR3DL2P43630 455 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 SNU13P55769 128 aaKnown RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PAFAH1B2P68402 229 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 ZIC1Q15915 447 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 HIKESHIQ53FT3 197 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 LDLRAD2Q5SZI1 272 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 OGFOD3Q6PK18 319 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 UNQ6494/PRO21346Q6UXR6 183 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 GVQW1Q8N7I0 195 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 CDRT4Q8N9R6 151 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 SLC16A11Q8NCK7 471 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 BCL2L2Q92843 193 aaPredicted RBP6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 KCNK15Q9H427 330 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 MSL2Q9HCI7 577 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PLEKHJ1Q9NW61 149 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PRR13Q9NZ81 148 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 KLHL13Q9P2N7 655 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 PRSS50Q9UI38 385 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 RNF150Q9ULK6 438 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 USP34Q70CQ2 3546 aa6.01□□□□□ -1.45
TGFBR3-209ENST00000532540 RAB29O14966 203 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 PRAMEF4O60810 478 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 NXPH2O95156 264 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 DDAH2O95865 285 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 ZNF728P0DKX0 622 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 MMP9P14780 707 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 KITLGP21583 273 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 HIST1H1TP22492 207 aaPredicted RBP6□□□□□ -1.45
TGFBR3-209ENST00000532540 BIDP55957 195 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 ARHGAP19Q14CB8 494 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 PRAMEF20Q5VT98 475 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 PRAMEF9Q5VWM5 478 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 TMEM268Q5VZI3 342 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 MRGPREQ86SM8 312 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 BIVMQ86UB2 503 aa6□□□□□ -1.45
TGFBR3-209ENST00000532540 APCDD1LQ8NCL9 501 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms