RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ACOT12Q8WYK0 555 aa11.99□□□□□ -0.49
CPSF1-206ENST00000531480 EMG1Q92979 244 aaKnown RBP11.99□□□□□ -0.49
CPSF1-206ENST00000531480 FAM234AQ9H0X4 552 aa11.99□□□□□ -0.49
CPSF1-206ENST00000531480 MMP27Q9H306 513 aa11.99□□□□□ -0.49
CPSF1-206ENST00000531480 MMP26Q9NRE1 261 aa11.99□□□□□ -0.49
CPSF1-206ENST00000531480 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
CPSF1-206ENST00000531480 ADAM30Q9UKF2 790 aa11.99□□□□□ -0.49
CPSF1-206ENST00000531480 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
CPSF1-206ENST00000531480 INSIG2Q9Y5U4 225 aa11.99□□□□□ -0.49
CPSF1-206ENST00000531480 IGHV2-70DA0A0C4DH43 119 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 KIR2DS1A0A191URI9 304 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 K7N7A8 449 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 NDUFB3O43676 98 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 CHRM2P08172 466 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 SELLP14151 372 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 ZNF182P17025 639 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-206ENST00000531480 CALRP27797 417 aaKnown RBP11.98□□□□□ -0.49
CPSF1-206ENST00000531480 NCS1P62166 190 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 PAX8Q06710 450 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 DYNC1I2Q13409 638 aaKnown RBP11.98□□□□□ -0.49
CPSF1-206ENST00000531480 KRTAP21-3Q3LHN1 58 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 LRRC10Q5BKY1 277 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 FOXB2Q5VYV0 432 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 CD276Q5ZPR3 534 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 GLT8D1Q68CQ7 371 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 FIP1L1Q6UN15 594 aaKnown RBP11.98□□□□□ -0.49
CPSF1-206ENST00000531480 FGFRL1Q8N441 504 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 JAGN1Q8N5M9 183 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 ZNRF1Q8ND25 227 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 RAB40AQ8WXH6 277 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
CPSF1-206ENST00000531480 NKX3-1Q99801 234 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-206ENST00000531480 CENPOQ9BU64 300 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 SHARPINQ9H0F6 387 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 METTL9Q9H1A3 318 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 IFT22Q9H7X7 185 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 LPAR2Q9HBW0 351 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 GHRLQ9UBU3 117 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 SLC25A10Q9UBX3 287 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-206ENST00000531480 OR5V1Q9UGF6 321 aa11.98□□□□□ -0.49
CPSF1-206ENST00000531480 LOC105371242A0A075B767 164 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 A0A0G2JMP0 313 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 A0A0X1KG70 313 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 CDRT1O95170 752 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 HAND1O96004 215 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 PPIAL4GP0DN37 164 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 PRKACAP17612 351 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 GABRA2P47869 451 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 CEBPDP49716 269 aaPredicted RBP11.97□□□□□ -0.49
CPSF1-206ENST00000531480 GPR176Q14439 515 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 IL13RA2Q14627 380 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 RSU1Q15404 277 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 Q6P435 159 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 C17orf107Q6ZR85 190 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 OR4M2Q8NGB6 313 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 S100ZQ8WXG8 99 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 SLC25A28Q96A46 364 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 MRPS24Q96EL2 167 aaKnown RBP11.97□□□□□ -0.49
CPSF1-206ENST00000531480 DCTN5Q9BTE1 182 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 DCUN1D5Q9BTE7 237 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 TMPRSS13Q9BYE2 586 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 NAA50Q9GZZ1 169 aaKnown RBP11.97□□□□□ -0.49
CPSF1-206ENST00000531480 YAE1D1Q9NRH1 226 aa11.97□□□□□ -0.49
CPSF1-206ENST00000531480 RPUSD1Q9UJJ7 312 aaKnown RBP11.97□□□□□ -0.49
CPSF1-206ENST00000531480 MRPS28Q9Y2Q9 187 aaKnown RBP11.97□□□□□ -0.49
CPSF1-206ENST00000531480 TMEM82A0PJX8 343 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 SLC17A2O00624 439 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 ENSAO43768 121 aaKnown RBP11.96□□□□□ -0.49
CPSF1-206ENST00000531480 PSPNO60542 156 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 TK1P04183 234 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 LIPFP07098 398 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 UBBP0CG47 229 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 RAB3BP20337 219 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 COL10A1Q03692 680 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 IKZF1Q13422 519 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 FAM189A2Q15884 450 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 DCAF12L2Q5VW00 463 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 GLIPR1L1Q6UWM5 242 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 C1orf229Q6ZS94 237 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-206ENST00000531480 BTN2A1Q7KYR7 527 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 LINC00596Q86U02 117 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 CHST4Q8NCG5 386 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 MCFD2Q8NI22 146 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 DYNC2LI1Q8TCX1 351 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 SLC25A46Q96AG3 418 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 SNX22Q96L94 193 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 PCDHB16Q9NRJ7 776 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 OR14J1Q9UGF5 321 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 OPN4Q9UHM6 478 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 PEX16Q9Y5Y5 336 aa11.96□□□□□ -0.49
CPSF1-206ENST00000531480 TRBV23-1A0A0A0MS06 115 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 INAFM1C9JVW0 142 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 SH2D1BO14796 132 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 CLPXO76031 633 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 OR2H2O95918 312 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 AVPP01185 164 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 FSHBP01225 129 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 CSN2P05814 226 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 GTF2F2P13984 249 aa11.95□□□□□ -0.5
CPSF1-206ENST00000531480 SDC2P34741 201 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms