RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 H2AFY2Q9P0M6 372 aaPredicted RBP7.3□□□□□ -1.24
NEDD8-206ENST00000531430 NUFIP1Q9UHK0 495 aaKnown RBP7.3□□□□□ -1.24
NEDD8-206ENST00000531430 HHLA2Q9UM44 414 aa7.3□□□□□ -1.24
NEDD8-206ENST00000531430 COPS3Q9UNS2 423 aa7.3□□□□□ -1.24
NEDD8-206ENST00000531430 UBE2J1Q9Y385 318 aaPredicted RBP7.3□□□□□ -1.24
NEDD8-206ENST00000531430 TMEM14AQ9Y6G1 99 aa7.3□□□□□ -1.24
NEDD8-206ENST00000531430 V9GYS6 101 aa7.3□□□□□ -1.24
NEDD8-206ENST00000531430 IGKV1-27A0A075B6S5 117 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 A0A1B0GTI1 187 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 FUOMA2VDF0 154 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 LINC01548A6NM66 108 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 SH2D1BO14796 132 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 SYT7O43581 403 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 E2F6O75461 281 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 CST1P01037 141 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 IGLV3-1P01715 115 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 RPLP1P05386 114 aaKnown RBP7.29□□□□□ -1.24
NEDD8-206ENST00000531430 OCM2P0CE71 109 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 OCMP0CE72 109 aaPredicted RBP7.29□□□□□ -1.24
NEDD8-206ENST00000531430 PRKACGP22612 351 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 MAGEA2P43356 314 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 GLIPR1P48060 266 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 ATP1B3P54709 279 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 CXCR4P61073 352 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 BNIP1Q12981 228 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 TMEM42Q69YG0 159 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 TEX38Q6PEX7 206 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 CD300LDQ6UXZ3 194 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 SLC35E3Q7Z769 313 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 DHFR2Q86XF0 187 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 ELMOD2Q8IZ81 293 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 DRAM1Q8N682 238 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 YIPF7Q8N8F6 280 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 OR56B4Q8NH76 319 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 LEAP2Q969E1 77 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 TOMM40LQ969M1 308 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 RCHY1Q96PM5 261 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 DCLRE1BQ9H816 532 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 EXOSC4Q9NPD3 245 aaKnown RBP7.29□□□□□ -1.24
NEDD8-206ENST00000531430 ACTR3BQ9P1U1 418 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 SNX5Q9Y5X3 404 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 SMAD5-AS1Q9Y6J3 95 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 R4GMQ9 66 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 DSCAML1Q8TD84 2053 aa7.29□□□□□ -1.24
NEDD8-206ENST00000531430 ZNF670-ZNF695F2Z2N8 137 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 GATBO75879 557 aaKnown RBP7.28□□□□□ -1.24
NEDD8-206ENST00000531430 IGLV1-47P01700 117 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 OSMP13725 252 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 ZNF44P15621 663 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 ERP29P30040 261 aaKnown RBP7.28□□□□□ -1.24
NEDD8-206ENST00000531430 SLC6A1P30531 599 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 PTGFRP43088 359 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 OR3A1P47881 315 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 MTCP1P56278 107 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 CDK5Q00535 292 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 ROM1Q03395 351 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 ZNF91Q05481 1191 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 PNLIPRP3Q17RR3 467 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 HLA-DRB5Q30154 266 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 CXorf66Q5JRM2 361 aaPredicted RBP7.28□□□□□ -1.24
NEDD8-206ENST00000531430 HEPN1Q6WQI6 88 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 BCDIN3DQ7Z5W3 292 aaKnown RBP7.28□□□□□ -1.24
NEDD8-206ENST00000531430 MOB3BQ86TA1 216 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 SBSPONQ8IVN8 264 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 SLC35F2Q8IXU6 374 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 STPG2Q8N412 459 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 COMMD1Q8N668 190 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 RFT1Q96AA3 541 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 LRGUKQ96M69 825 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 CNN2Q99439 309 aaKnown RBP7.28□□□□□ -1.24
NEDD8-206ENST00000531430 TBX5Q99593 518 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 MAGIXQ9H6Y5 334 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 ARL8BQ9NVJ2 186 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 DNAJB9Q9UBS3 223 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 TAGLN3Q9UI15 199 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 ZNF256Q9Y2P7 627 aaPredicted RBP7.28□□□□□ -1.24
NEDD8-206ENST00000531430 RYR2Q92736 4967 aa7.28□□□□□ -1.24
NEDD8-206ENST00000531430 EPPK1P58107 5090 aaKnown RBP7.28□□□□□ -1.24
NEDD8-206ENST00000531430 STAB2Q8WWQ8 2551 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 TCRBV5S2A0A599 114 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 LY6LH3BQJ8 138 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 ENTPD6O75354 484 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 OR2H2O95918 312 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 IGKV1D-33P01593 117 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 IGKV1-33P01594 117 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 SLC2A5P22732 501 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 CHATP28329 748 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 RBP2P50120 134 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 GNG10P50151 68 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 HSP90B2PQ58FF3 399 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 KRBOX4Q5JUW0 171 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 UTF1Q5T230 341 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 TMEM179BQ7Z7N9 219 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 THNSL2Q86YJ6 484 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 Q8IYB0 196 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 HS3ST5Q8IZT8 346 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 C5orf56Q8N8D9 126 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 OR8U1Q8NH10 309 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 OR9G1Q8NH87 305 aa7.27□□□□□ -1.25
NEDD8-206ENST00000531430 CCDC134Q9H6E4 229 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms