RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 FAM90A8PA6NJQ4 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A7PA6NKC0 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A22PA8MWA6 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A12PA8MX19 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A5PA8MXJ8 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A23PA8MXZ1 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 ZNF701M0R085 212 aaPredicted RBP14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DVL1O14640 695 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 GEMIN2O14893 280 aaKnown RBP14.07□□□□□ -0.16
SF3B2-211ENST00000531041 NDUFB3O43676 98 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 ZNF737O75373 536 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FCN3O75636 299 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 MPIG6BO95866 241 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 OR2H2O95918 312 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A15PP0C7V4 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A13PP0C7W8 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A14PP0C7W9 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM90A24PP0C7X0 464 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DUX4L2P0CJ85 424 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DUX4L3P0CJ86 424 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DUX4L4P0CJ87 422 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DUX4L5P0CJ88 424 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DUX4L6P0CJ89 424 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DUX4L7P0CJ90 424 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 SCAND1P57086 179 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 SEC61A1P61619 476 aaKnown RBP14.07□□□□□ -0.16
SF3B2-211ENST00000531041 COL10A1Q03692 680 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 SPCS2Q15005 226 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 TMEM249Q2WGJ8 235 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 IDNKQ5T6J7 187 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 WDR25Q64LD2 544 aaPredicted RBP14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DUX4L9Q6RFH8 374 aaPredicted RBP14.07□□□□□ -0.16
SF3B2-211ENST00000531041 CHST4Q8NCG5 386 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 SSBP3Q9BWW4 388 aaPredicted RBP14.07□□□□□ -0.16
SF3B2-211ENST00000531041 TM2D1Q9BX74 207 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 BARHL1Q9BZE3 327 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM234AQ9H0X4 552 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 NDUFA13Q9P0J0 144 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DUX4Q9UBX2 424 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 CLN8Q9UBY8 286 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 ABCA1O95477 2261 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 WNK2Q9Y3S1 2297 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 A0A0B4J203 849 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 SMIM31A0A1B0GVY4 71 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 CCDC160A6NGH7 325 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 A8MXK9 166 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 FAM157AC9JC47 383 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 K7N7A8 449 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DEGS1O15121 323 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 GPR37O15354 613 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 SELLP14151 372 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 ZNF44P15621 663 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 RORCP51449 518 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 GNB2P62879 340 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 RPS27AP62979 156 aaKnown RBP14.07□□□□□ -0.16
SF3B2-211ENST00000531041 SCN1BQ07699 218 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 IKZF1Q13422 519 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 TAF9Q16594 264 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 C11orf91Q3C1V1 193 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 LRRC10Q5BKY1 277 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 PTX4Q96A99 478 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 C18orf12Q96KH6 178 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 SNX22Q96L94 193 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 URM1Q9BTM9 101 aaKnown RBP14.07□□□□□ -0.16
SF3B2-211ENST00000531041 ABRACLQ9P1F3 81 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 OR5V1Q9UGF6 321 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 RAB22AQ9UL26 194 aa14.07□□□□□ -0.16
SF3B2-211ENST00000531041 DPPA5A6NC42 116 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 B4DSR2 109 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 SMAD7O15105 426 aaKnown RBP14.06□□□□□ -0.16
SF3B2-211ENST00000531041 FOXH1O75593 365 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 OR7C1O76099 320 aaPredicted RBP14.06□□□□□ -0.16
SF3B2-211ENST00000531041 TK1P04183 234 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 RAB6AP20340 208 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 PDCD1Q15116 288 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 C17orf107Q6ZR85 190 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 FAM89BQ8N5H3 189 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 ASCC1Q8N9N2 400 aaKnown RBP14.06□□□□□ -0.16
SF3B2-211ENST00000531041 TMEM185AQ8NFB2 350 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 OR5D13Q8NGL4 314 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 KCTD12Q96CX2 325 aaKnown RBP14.06□□□□□ -0.16
SF3B2-211ENST00000531041 TMUB1Q9BVT8 246 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 SHARPINQ9H0F6 387 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 LPAR5Q9H1C0 372 aa14.06□□□□□ -0.16
SF3B2-211ENST00000531041 SLC25A10Q9UBX3 287 aaPredicted RBP14.06□□□□□ -0.16
SF3B2-211ENST00000531041 RSL24D1Q9UHA3 163 aaKnown RBP14.06□□□□□ -0.16
SF3B2-211ENST00000531041 POLR3KQ9Y2Y1 108 aaPredicted RBP14.06□□□□□ -0.16
SF3B2-211ENST00000531041 ACANP16112 2415 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 MAST4O15021 2626 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 KIAA2026Q5HYC2 2103 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 TRAV24A0A0B4J272 114 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 TMEM82A0PJX8 343 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 KIAA1324LA8MWY0 1029 aaPredicted RBP14.05□□□□□ -0.16
SF3B2-211ENST00000531041 H3BUI4 141 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 SIRPB1O00241 398 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 SLC33A1O00400 549 aaPredicted RBP14.05□□□□□ -0.16
SF3B2-211ENST00000531041 PSPNO60542 156 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 PAHP00439 452 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 IGHV4-31P0DP07 118 aa14.05□□□□□ -0.16
SF3B2-211ENST00000531041 SNRPBP14678 240 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms