RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 RRP15Q9Y3B9 282 aaKnown RBP0.61□□□□□ -2.31
NUP98-218ENST00000530516 MED13Q9UHV7 2174 aa0.61□□□□□ -2.31
NUP98-218ENST00000530516 FAM240AA0A1B0GVK7 77 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 CD300LBA8K4G0 201 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 ODF3BA8MYP8 253 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 UPK2O00526 184 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 RNF113AO15541 343 aaKnown RBP0.6□□□□□ -2.31
NUP98-218ENST00000530516 GATCO43716 136 aaKnown RBP0.6□□□□□ -2.31
NUP98-218ENST00000530516 OR5AL1P0C617 328 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 GABRA1P14867 456 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 TAS2R60P59551 318 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 TMEM176BQ3YBM2 270 aaPredicted RBP0.6□□□□□ -2.31
NUP98-218ENST00000530516 CLEC12AQ5QGZ9 265 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 PLCXD3Q63HM9 321 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 SLC35D2Q76EJ3 337 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 KATNAL2Q8IYT4 538 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 MFSD8Q8NHS3 518 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 NT5CQ8TCD5 201 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 YPEL4Q96NS1 127 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 B9D2Q9BPU9 175 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 SHCBP1LQ9BZQ2 653 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 ZNF436Q9C0F3 470 aaPredicted RBP0.6□□□□□ -2.31
NUP98-218ENST00000530516 AICDAQ9GZX7 198 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 CHRNA10Q9GZZ6 450 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 WDR55Q9H6Y2 383 aaPredicted RBP0.6□□□□□ -2.31
NUP98-218ENST00000530516 CYB5R1Q9UHQ9 305 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 NCKAP5O14513 1909 aa0.6□□□□□ -2.31
NUP98-218ENST00000530516 COL6A6A6NMZ7 2263 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 NYNRINQ9P2P1 1898 aaKnown RBP0.59□□□□□ -2.31
NUP98-218ENST00000530516 SDK1Q7Z5N4 2213 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 TRBV24-1A0A075B6N3 115 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 A0A1B0GTI1 187 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 SERTM2A0A1B0GWG4 89 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 OR2AT4A6NND4 320 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 CENPXA8MT69 81 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 LECT2O14960 151 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 TRAPPC6AO75865 159 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 PLEKHA8P1O95397 391 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 RAB36O95755 333 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 CD9P21926 228 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 GALP22466 123 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 ELK4P28324 431 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 HTR2CP28335 458 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 PSMC5P62195 406 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 RAB11BQ15907 218 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 Q499Y3 187 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 SPIN4Q56A73 249 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 UBE2NLQ5JXB2 153 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 IDNKQ5T6J7 187 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 FAM27D1Q5T7N8 215 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 SYT6Q5T7P8 510 aaPredicted RBP0.59□□□□□ -2.31
NUP98-218ENST00000530516 N4BP2L1Q5TBK1 243 aaPredicted RBP0.59□□□□□ -2.31
NUP98-218ENST00000530516 MLIPQ5VWP3 458 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 ZNF773Q6PK81 442 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 UGT2A3Q6UWM9 527 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 OTUD6AQ7L8S5 288 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 MRPL21Q7Z2W9 205 aaKnown RBP0.59□□□□□ -2.31
NUP98-218ENST00000530516 GPR119Q8TDV5 335 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 GPX8Q8TED1 209 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 PIH1D2Q8WWB5 315 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 QKIQ96PU8 341 aaKnown RBP eCLIP0.59□□□□□ -2.31
NUP98-218ENST00000530516 COA1Q9GZY4 146 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 OR2AG1Q9H205 316 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 C8orf33Q9H7E9 229 aaPredicted RBP0.59□□□□□ -2.31
NUP98-218ENST00000530516 SDHAF3Q9NRP4 125 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 FLVCR2Q9UPI3 526 aa0.59□□□□□ -2.31
NUP98-218ENST00000530516 C14orf166Q9Y224 244 aaKnown RBP0.59□□□□□ -2.31
NUP98-218ENST00000530516 AQRO60306 1485 aaKnown RBP eCLIP0.59□□□□□ -2.327e-6■■□□□ 12.2
NUP98-218ENST00000530516 SUPT3HB4E1H0 165 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 F5H5T6 163 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 H3BRN7 92 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 SH2D1AO60880 128 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 SCGB1C2P0DMR2 95 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 ANXA8P13928 327 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 TAC1P20366 129 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 PMCHP20382 165 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 IVDP26440 423 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 CSKP41240 450 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 MAGEA6P43360 314 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 SLC35B1P78383 322 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 LCN2P80188 198 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 BNIP2Q12982 314 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 ATP6V1FQ16864 119 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 ACSBG2Q5FVE4 666 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 ANXA8L1Q5VT79 327 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 GLYATQ6IB77 296 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 ULK3Q6PHR2 472 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 RBM45Q8IUH3 476 aaKnown RBP0.58□□□□□ -2.32
NUP98-218ENST00000530516 NELFCDQ8IXH7 590 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 SCGB1C1Q8TD33 95 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 DNAJC30Q96LL9 226 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 ZNF251Q9BRH9 671 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 ANP32EQ9BTT0 268 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 PRORYQ9H606 182 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 PLEKHA1Q9HB21 404 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 LZTFL1Q9NQ48 299 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 C12orf4Q9NQ89 552 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 VPREB3Q9UKI3 123 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 LINC00588Q9Y4M8 146 aa0.58□□□□□ -2.32
NUP98-218ENST00000530516 PHLPP2Q6ZVD8 1323 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms