RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RAB3AP20336 220 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 LMO1P25800 156 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 OR3A1P47881 315 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 EDDM3AQ14507 147 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 PRR31Q5SQ13 230 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 C17orf50Q8WW18 174 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 WFDC12Q8WWY7 111 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 TMEM80Q96HE8 168 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 GSTK1Q9Y2Q3 226 aa26.87■■□□□ 1.89
SSSCA1-205ENST00000527920 OGG1O15527 345 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 OR2H2O95918 312 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 COX7A1P24310 79 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 BMXP51813 675 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 ZNF782Q6ZMW2 699 aaPredicted RBP26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 CHST4Q8NCG5 386 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 OR4S1Q8NGB4 309 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 OR13D1Q8NGV5 346 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 SMIM19Q96E16 107 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 CHST6Q9GZX3 395 aa26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 CHCHD3Q9NX63 227 aaKnown RBP26.86■■□□□ 1.89
SSSCA1-205ENST00000527920 FAM90A8PA6NJQ4 464 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 IGHV1-8P0DP01 117 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 TMEM225BP0DP42 221 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 TGFBR2P37173 567 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 P2RX3P56373 397 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 LGALS4P56470 323 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 DHRS7BQ6IAN0 325 aaPredicted RBP26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 C8orf59Q8N0T1 100 aaPredicted RBP26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 PXT1Q8NFP0 134 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 OR11H6Q8NGC7 330 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 CNOT2Q9NZN8 540 aaKnown RBP26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 DSCAML1Q8TD84 2053 aa26.85■■□□□ 1.89
SSSCA1-205ENST00000527920 ODF3BA8MYP8 253 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 MAGEB3O15480 346 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 CALCBP10092 127 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 SNU13P55769 128 aaKnown RBP26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 LRRC75BQ2VPJ9 315 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 ELP2Q6IA86 826 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 ASPHD2Q6ICH7 369 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 LINC01006Q8NI28 216 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 FBLIM1Q8WUP2 373 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 GGHQ92820 318 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 SSX3Q99909 188 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 VCXQ9H320 206 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 C16orf95Q9H693 158 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 ZNF281Q9Y2X9 895 aa26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 TBL2Q9Y4P3 447 aaKnown RBP26.84■■□□□ 1.89
SSSCA1-205ENST00000527920 FUOMA2VDF0 154 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 EFCAB10A6NFE3 127 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 CSN2P05814 226 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 SOX2P48431 317 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 MTNR1BP49286 362 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 ZNF626Q68DY1 528 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 ZNF485Q8NCK3 441 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 TMEM106AQ96A25 262 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 DCLRE1BQ9H816 532 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 CLEC2DQ9UHP7 191 aa26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 SIRT4Q9Y6E7 314 aaPredicted RBP26.83■■□□□ 1.89
SSSCA1-205ENST00000527920 H3BUX3 64 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 SIRPB1O00241 398 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 TSPAN9O75954 239 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 GNAO1P09471 354 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 ST3GAL4Q11206 333 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 DMKNQ6E0U4 476 aaPredicted RBP26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 Q6ZSV7 163 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 TPRX1Q8N7U7 411 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 OR51A2Q8NGJ7 313 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 FOXRED1Q96CU9 486 aaPredicted RBP26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 PLCXD1Q9NUJ7 323 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 UBE2J1Q9Y385 318 aaPredicted RBP26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 RNF114Q9Y508 228 aa26.82■■□□□ 1.88
SSSCA1-205ENST00000527920 VGLL3A8MV65 326 aa26.81■■□□□ 1.88
SSSCA1-205ENST00000527920 ALDOBP05062 364 aa26.81■■□□□ 1.88
SSSCA1-205ENST00000527920 Q6P435 159 aa26.81■■□□□ 1.88
SSSCA1-205ENST00000527920 TAS2R4Q9NYW5 299 aa26.81■■□□□ 1.88
SSSCA1-205ENST00000527920 SESN1Q9Y6P5 492 aa26.81■■□□□ 1.88
SSSCA1-205ENST00000527920 A0A0G2JK05 382 aa26.8■■□□□ 1.88
SSSCA1-205ENST00000527920 LALBAP00709 142 aa26.8■■□□□ 1.88
SSSCA1-205ENST00000527920 ZNF44P15621 663 aa26.8■■□□□ 1.88
SSSCA1-205ENST00000527920 LAIR2Q6ISS4 152 aa26.8■■□□□ 1.88
SSSCA1-205ENST00000527920 Q8NFD4 153 aa26.8■■□□□ 1.88
SSSCA1-205ENST00000527920 MEX3AA1L020 520 aaKnown RBP26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 ANKRD65E5RJM6 399 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 GABRPO00591 440 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 CLPXO76031 633 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 PROK1P58294 105 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 ASCL4Q6XD76 172 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 LIAT1Q6ZQX7 453 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 CORO2AQ92828 525 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 MALSU1Q96EH3 234 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 GPER1Q99527 375 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 RAB18Q9NP72 206 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 TMEM138Q9NPI0 162 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 PSORS1C1Q9UIG5 152 aa26.79■■□□□ 1.88
SSSCA1-205ENST00000527920 TRGV10A0A0A0MS01 117 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 TRBV5-5A0A0J9YX44 114 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 ARG1P05089 322 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 TAS2R43P59537 309 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 PPP3R1P63098 170 aa26.78■■□□□ 1.88
SSSCA1-205ENST00000527920 OR51T1Q8NGJ9 327 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms