RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 A0A0G2JK05 382 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 hADV38S2A0JD32 116 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 A6NDX4 124 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 MGST3O14880 152 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 ALX3O95076 343 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 TSPAN15O95858 294 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 OR2H2O95918 312 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 LMO1P25800 156 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 ERP29P30040 261 aaKnown RBP8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 GABRA5P31644 462 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 GLIPR1P48060 266 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 ETV1P50549 477 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 P2RX3P56373 397 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 LGALS4P56470 323 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 SSX2Q16385 188 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 SPIN3Q5JUX0 258 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 UTF1Q5T230 341 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF529Q6P280 563 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 SAXO1Q8IYX7 474 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 PARP16Q8N5Y8 322 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 OR13D1Q8NGV5 346 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 OR5AK2Q8NH90 309 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 MALSU1Q96EH3 234 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 NKX3-1Q99801 234 aaPredicted RBP8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 JAM3Q9BX67 310 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 COMMD4Q9H0A8 199 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 EXOSC4Q9NPD3 245 aaKnown RBP8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 FOXJ3Q9UPW0 622 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 RPL36Q9Y3U8 105 aaKnown RBP8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 TBL2Q9Y4P3 447 aaKnown RBP8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 LINC00312Q9Y6C7 94 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 SESN1Q9Y6P5 492 aa8.42□□□□□ -1.06
PRPF40B-204ENST00000527253 IGHV2-26A0A0B4J1V2 119 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 TMEM212A6NML5 194 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 M0QZ24 198 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 SLC33A1O00400 549 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 SH2D1BO14796 132 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 TIMM23O14925 209 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 SULT1B1O43704 296 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 CYB5AP00167 134 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 TMEM225BP0DP42 221 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 GBX2P52951 348 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 DEFA6Q01524 100 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 AESQ08117 197 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 DYNC1I2Q13409 638 aaKnown RBP8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 HABP2Q14520 560 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 CDK5R1Q15078 307 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 KISS1Q15726 138 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 FAM189A2Q15884 450 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 PRAMEF5Q5TYX0 476 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 OR2G6Q5TZ20 316 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 LPCAT4Q643R3 524 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 TMEM219Q86XT9 240 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 SERPINA12Q8IW75 414 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 OR51A2Q8NGJ7 313 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 CNIH3Q8TBE1 160 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 RPS4Y2Q8TD47 263 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 MRPL48Q96GC5 212 aaKnown RBP8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 COQ2Q96H96 371 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 TMEM133Q9H2Q1 129 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF702PQ9H963 129 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 NEK6Q9HC98 313 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 SMPD3Q9NY59 655 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 TCF19Q9Y242 345 aa8.41□□□□□ -1.06
PRPF40B-204ENST00000527253 GABRPO00591 440 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 LALBAP00709 142 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 CCDC159P0C7I6 412 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 OCM2P0CE71 109 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 OCMP0CE72 109 aaPredicted RBP8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 SOX2P48431 317 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 SCN1BQ07699 218 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 MRPL28Q13084 256 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 HERPUD1Q15011 391 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 LRRC36Q1X8D7 754 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 KLHL22Q53GT1 634 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 FBLN7Q53RD9 439 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF691Q5VV52 312 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 LAIR2Q6ISS4 152 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 Q6ZS46 218 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 Q8N2B8 174 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 C11orf44Q8N8P7 122 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 OR5D14Q8NGL3 314 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 OR4P4Q8NGL7 312 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 OR4C13Q8NGP0 309 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 CFHR4Q92496 578 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 CORO2AQ92828 525 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 ORAI1Q96D31 301 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 MMP27Q9H306 513 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 RANBP3Q9H6Z4 567 aaPredicted RBP8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 SERTAD4Q9NUC0 356 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 ING3Q9NXR8 418 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 TAS2R4Q9NYW5 299 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF581Q9P0T4 197 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 CLEC2DQ9UHP7 191 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 DHDHQ9UQ10 334 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 UBE2J1Q9Y385 318 aaPredicted RBP8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 HILPDAQ9Y5L2 63 aa8.4□□□□□ -1.06
PRPF40B-204ENST00000527253 NOTCH3Q9UM47 2321 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 TRAV24A0A0B4J272 114 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 FAM172BPA6NC97 362 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms