RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 RBFOX1Q9NWB1 397 aaKnown RBP7.28□□□□□ -1.24
CCDC90B-208ENST00000527025 SLC25A10Q9UBX3 287 aaPredicted RBP7.28□□□□□ -1.24
CCDC90B-208ENST00000527025 FOXJ3Q9UPW0 622 aa7.28□□□□□ -1.24
CCDC90B-208ENST00000527025 SLC7A11Q9UPY5 501 aa7.28□□□□□ -1.24
CCDC90B-208ENST00000527025 TRDV1A0A1B0GX56 115 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 MEX3AA1L020 520 aaKnown RBP7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 RNASEK-C17orf49H0YIS7 233 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 NXPH2O95156 264 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 ECDO95905 644 aaPredicted RBP7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 ALDOBP05062 364 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 LIPFP07098 398 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 CD37P11049 281 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 NDUFB7P17568 137 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 RAB3AP20336 220 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 GALP22466 123 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 BDKRB2P30411 391 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 ALDH3B2P48448 385 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 RBP2P50120 134 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 ATP1B3P54709 279 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 MTCP1P56278 107 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 CAV3P56539 151 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 COL10A1Q03692 680 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 PDZK1IP1Q13113 114 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 DEFB112Q30KQ8 113 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 LRRC10Q5BKY1 277 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 TMEM200BQ69YZ2 307 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 C17orf107Q6ZR85 190 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 USP43Q70EL4 1123 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 VMO1Q7Z5L0 202 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 CEACAM19Q7Z692 300 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 Q8N3U1 123 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 PNKDQ8N490 385 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 BPIFB2Q8N4F0 458 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 PNLDC1Q8NA58 520 aaKnown RBP7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 OR4M1Q8NGD0 313 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 OR5D18Q8NGL1 313 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 SPATA3Q8NHX4 192 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 H1FXQ92522 213 aaKnown RBP7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 PHYHIPQ92561 330 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 LHX4Q969G2 390 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 YIPF6Q96EC8 236 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 MED30Q96HR3 178 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 AJUBAQ96IF1 538 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 CEP19Q96LK0 163 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 GFI1Q99684 422 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 TMEM138Q9NPI0 162 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 SIRT7Q9NRC8 400 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 OR14J1Q9UGF5 321 aa7.27□□□□□ -1.25
CCDC90B-208ENST00000527025 K7N7A8 449 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 PSPNO60542 156 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 KNG1P01042 644 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 TK1P04183 234 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 TFAP2AP05549 437 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 FGF9P31371 208 aaPredicted RBP7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 POU3F4P49335 361 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 PPP3R1P63098 170 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 KLRD1Q13241 179 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 SLC9A3R2Q15599 337 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 KISS1Q15726 138 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 SMIM21Q3B7S5 101 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 C11orf91Q3C1V1 193 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 HSD17B12Q53GQ0 312 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 DDI2Q5TDH0 399 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 ASCL4Q6XD76 172 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 TCF23Q7RTU1 214 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 TMEM185AQ8NFB2 350 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 OR13F1Q8NGS4 319 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 C17orf50Q8WW18 174 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 CYYR1Q96J86 154 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 MRPS26Q9BYN8 205 aaKnown RBP7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 OR51E2Q9H255 320 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 PRDM13Q9H4Q3 707 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 ZNF581Q9P0T4 197 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 ONECUT1Q9UBC0 465 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 STUB1Q9UNE7 303 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 POLDIP2Q9Y2S7 368 aa7.26□□□□□ -1.25
CCDC90B-208ENST00000527025 A0A0A6YYJ9 748 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 IGHV1-69DA0A0B4J2H0 117 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 A0A0U1RQK1 487 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 A0A1W2PRD5 423 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 A0A1W2PRF3 423 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 A0A1W2PRM7 423 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 DNAJC9-AS1A6NH13 148 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 NKX6-3A6NJ46 265 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 ARL6IP5O75915 188 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 KDM4BO94953 1096 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 IGHV1-69P01742 117 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 HCKP08631 526 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 CCL3L1P16619 93 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 CD36P16671 472 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 GADD45AP24522 165 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 FPR2P25090 351 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 PAX6P26367 422 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 CALRP27797 417 aaKnown RBP7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 OR3A4PP47883 348 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 SNU13P55769 128 aaKnown RBP7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 DLX6P56179 175 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 UBA52P62987 128 aaKnown RBP7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 ZNF273Q14593 569 aa7.25□□□□□ -1.25
CCDC90B-208ENST00000527025 PDCD1Q15116 288 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms