RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 TSPAN31Q12999 210 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 PDCD1Q15116 288 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 FCN2Q15485 313 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 MPPED2Q15777 294 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 KCNMB1Q16558 191 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 CLEC12AQ5QGZ9 265 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 SFRP4Q6FHJ7 346 aaPredicted RBP9.73□□□□□ -0.85
CAPN1-204ENST00000526468 DPY19L2P2Q6ZN68 376 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 SLC26A10Q8NG04 563 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 OR52J3Q8NH60 311 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 ERGIC1Q969X5 290 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 FAM71F1Q96KD3 344 aaPredicted RBP9.73□□□□□ -0.85
CAPN1-204ENST00000526468 PRDM13Q9H4Q3 707 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 HEXA-AS1Q9H8Q6 139 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 NUDT15Q9NV35 164 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 H2AFY2Q9P0M6 372 aaPredicted RBP9.73□□□□□ -0.85
CAPN1-204ENST00000526468 KCNK7Q9Y2U2 307 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 NOP16Q9Y3C1 178 aaKnown RBP9.73□□□□□ -0.85
CAPN1-204ENST00000526468 POMT1Q9Y6A1 747 aa9.73□□□□□ -0.85
CAPN1-204ENST00000526468 UBE2QL1A1L167 161 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 MFSD2BA6NFX1 497 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 MPTX1A8MV57 137 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 AIPO00170 330 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 LGALS8O00214 317 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 SSNA1O43805 119 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 GPR137BO60478 399 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 HPGDSO60760 199 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 TSC22D2O75157 780 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 GATBO75879 557 aaKnown RBP9.72□□□□□ -0.85
CAPN1-204ENST00000526468 RENP00797 406 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 CA6P23280 308 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 PSMB10P40306 273 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 CDKN2AP42771 156 aaKnown RBP9.72□□□□□ -0.85
CAPN1-204ENST00000526468 CBX5P45973 191 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 OMPP47874 163 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 MECP2P51608 486 aaKnown RBP9.72□□□□□ -0.85
CAPN1-204ENST00000526468 FXYD6P3P58550 94 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 HIST1H3AP68431 136 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 FABP5Q01469 135 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 DBPQ10586 325 aaPredicted RBP9.72□□□□□ -0.85
CAPN1-204ENST00000526468 ZNF273Q14593 569 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 NHLRC3Q5JS37 347 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 BCL2L15Q5TBC7 163 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 HIST2H3PS2Q5TEC6 136 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 SLC18B1Q6NT16 456 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 SMARCD3Q6STE5 483 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 ZNF841Q6ZN19 808 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 ZNF620Q6ZNG0 422 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 HIST2H3AQ71DI3 136 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 PNLDC1Q8NA58 520 aaKnown RBP9.72□□□□□ -0.85
CAPN1-204ENST00000526468 CLRN3Q8NCR9 226 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 OR2AJ1Q8NGZ0 328 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 ORAI1Q96D31 301 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 SLC25A32Q9H2D1 315 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 IFT22Q9H7X7 185 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 IFT46Q9NQC8 304 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 SDHAF2Q9NX18 166 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 TVP23BQ9NYZ1 205 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 RNF7Q9UBF6 113 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 RNF114Q9Y508 228 aa9.72□□□□□ -0.85
CAPN1-204ENST00000526468 IGHV1-69DA0A0B4J2H0 117 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 CENPVL3A0A0U1RRI6 287 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 LINC00854A0A1B0GVQ3 168 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 A0A1B0GWJ7 208 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 SLC22A31A6NKX4 558 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 L7N2F9 121 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 M0R135 149 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 PDCD5O14737 125 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 TNFRSF13BO14836 293 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-204ENST00000526468 TSPAN15O95858 294 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 TXNDC12O95881 172 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 IGHV1-69P01742 117 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 IGHV4-59P01825 116 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 MMP9P14780 707 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 SLC6A6P31641 620 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 HOXA1P49639 335 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-204ENST00000526468 RPL15P61313 204 aaKnown RBP9.71□□□□□ -0.86
CAPN1-204ENST00000526468 RPS25P62851 125 aaKnown RBP9.71□□□□□ -0.86
CAPN1-204ENST00000526468 ECH1Q13011 328 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 GINS1Q14691 196 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 KRTAP27-1Q3LI81 207 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 COLCA1Q6ZS62 124 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 RHOUQ7L0Q8 258 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 C1QL4Q86Z23 238 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 PDZD9Q8IXQ8 264 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 TIGD4Q8IY51 512 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 LNX2Q8N448 690 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 ZNF485Q8NCK3 441 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 SDR9C7Q8NEX9 313 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 OR4K13Q8NH42 304 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 OR2AE1Q8NHA4 323 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 SMIM4Q8WVI0 70 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 ST8SIA4Q92187 359 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 DYRK2Q92630 601 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 LHX4Q969G2 390 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 PHYHIPLQ96FC7 376 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 ZNF799Q96GE5 643 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 NMNAT3Q96T66 252 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 C1orf123Q9NWV4 160 aa9.71□□□□□ -0.86
CAPN1-204ENST00000526468 TAS2R8Q9NYW2 309 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms