RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TMEM246Q9BRR3 403 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 TM2D1Q9BX74 207 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 TMEM59Q9BXS4 323 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 NXF2Q9GZY0 626 aaKnown RBP9.95□□□□□ -0.82
PVT1-215ENST00000522963 LPAR5Q9H1C0 372 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 LPAR2Q9HBW0 351 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 ZNF581Q9P0T4 197 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 COMMD3Q9UBI1 195 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 OR14J1Q9UGF5 321 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 ZNF222Q9UK12 451 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 RAB22AQ9UL26 194 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.95□□□□□ -0.821e-10■■□□□ 12.6
PVT1-215ENST00000522963 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
PVT1-215ENST00000522963 ABCA2Q9BZC7 2435 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
PVT1-215ENST00000522963 WNK2Q9Y3S1 2297 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 A0A075B6Q4 140 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 A8MV72 311 aaPredicted RBP9.94□□□□□ -0.82
PVT1-215ENST00000522963 GEMIN2O14893 280 aaKnown RBP9.94□□□□□ -0.82
PVT1-215ENST00000522963 HAND1O96004 215 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 TGFAP01135 160 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 PRDX2P32119 198 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 GABRA2P47869 451 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 TAF9Q16594 264 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 TMEM155Q4W5P6 130 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 SPIN3Q5JUX0 258 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 Q6P435 159 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 MZT2AQ6P582 158 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 FIP1L1Q6UN15 594 aaKnown RBP9.94□□□□□ -0.82
PVT1-215ENST00000522963 LYPD2Q6UXB3 125 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 MSI2Q96DH6 328 aaKnown RBP9.94□□□□□ -0.82
PVT1-215ENST00000522963 CCL13Q99616 98 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 NICN1Q9BSH3 213 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 URM1Q9BTM9 101 aaKnown RBP9.94□□□□□ -0.82
PVT1-215ENST00000522963 SEBOXQ9HB31 216 aaPredicted RBP9.94□□□□□ -0.82
PVT1-215ENST00000522963 RHBDL2Q9NX52 303 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 ZANQ9Y493 2812 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 SETD2Q9BYW2 2564 aaPredicted RBP9.94□□□□□ -0.82
PVT1-215ENST00000522963 ARHGAP32A7KAX9 2087 aa9.94□□□□□ -0.82
PVT1-215ENST00000522963 A0A1B0GW55 424 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 CEACAM18A8MTB9 384 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 CTDSP2O14595 271 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 SH2D1BO14796 132 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DEGS1O15121 323 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 HPGDSO60760 199 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 OR2H2O95918 312 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DUX4L2P0CJ85 424 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DUX4L3P0CJ86 424 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DUX4L4P0CJ87 422 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DUX4L5P0CJ88 424 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DUX4L6P0CJ89 424 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DUX4L7P0CJ90 424 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 GABRR1P24046 479 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 SCN1BQ07699 218 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 IKZF1Q13422 519 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 KCNJ8Q15842 424 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 ATPAF1Q5TC12 328 aaPredicted RBP9.93□□□□□ -0.82
PVT1-215ENST00000522963 SIGIRRQ6IA17 410 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DUX4L9Q6RFH8 374 aaPredicted RBP9.93□□□□□ -0.82
PVT1-215ENST00000522963 ZNF788Q6ZQV5 615 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DCDC5Q6ZRR9 648 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 LINC00596Q86U02 117 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 RTN4RL2Q86UN3 420 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 CMTM4Q8IZR5 234 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 MUC20Q8N307 709 aaPredicted RBP9.93□□□□□ -0.82
PVT1-215ENST00000522963 FAM89BQ8N5H3 189 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 SAMD12Q8N8I0 201 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 MCFD2Q8NI22 146 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 CYYR1Q96J86 154 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 GAFA1Q96PS6 74 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 MIXL1Q9H2W2 232 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 CTSZQ9UBR2 303 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 DUX4Q9UBX2 424 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 GLS2Q9UI32 602 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 PCDHB10Q9UN67 800 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 MAB21L2Q9Y586 359 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 NAV3Q8IVL0 2385 aa9.93□□□□□ -0.82
PVT1-215ENST00000522963 TRAV24A0A0B4J272 114 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 FOXI3A8MTJ6 420 aaPredicted RBP9.92□□□□□ -0.82
PVT1-215ENST00000522963 FAM157AC9JC47 383 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 SIRPB1O00241 398 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 SIGLEC5O15389 551 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 SOCS1O15524 211 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 ADAM20O43506 726 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 NDUFA2O43678 99 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 OR7C1O76099 320 aaPredicted RBP9.92□□□□□ -0.82
PVT1-215ENST00000522963 EIF4EP06730 217 aaKnown RBP9.92□□□□□ -0.82
PVT1-215ENST00000522963 CHRM2P08172 466 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 SELLP14151 372 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 ZNF44P15621 663 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 CPT2P23786 658 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 PITPNBP48739 271 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 VEGFCP49767 419 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 COL10A1Q03692 680 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 MPV17LQ2QL34 196 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 MOGAT2Q3SYC2 334 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 UBE2NLQ5JXB2 153 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 SPICQ8N5J4 248 aa9.92□□□□□ -0.82
PVT1-215ENST00000522963 FAM216BQ8N7L0 139 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms