RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 A0A075B6Q4 140 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 IGKV1D-17A0A075B6S4 117 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 IGHV4-30-2A0A087WSY4 118 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 A0A1W2PP11 408 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 VWC2LB2RUY7 222 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 DEGS1O15121 323 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 TMPRSS2O15393 492 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 ADAM20O43506 726 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 PAHP00439 452 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 CHRM2P08172 466 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 GABRR1P24046 479 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 PRDX2P32119 198 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 ATPAF1Q5TC12 328 aaPredicted RBP11.82□□□□□ -0.52
SDC2-203ENST00000519587 RAB12Q6IQ22 244 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 ZNF561Q8N587 486 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 ASCC1Q8N9N2 400 aaKnown RBP11.82□□□□□ -0.52
SDC2-203ENST00000519587 OR8B3Q8NGG8 313 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 OR56B1Q8NGI3 324 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 RAB40AQ8WXH6 277 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 SEH1LQ96EE3 360 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 CMTM3Q96MX0 182 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 OR8B2Q96RD0 313 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 SLIRPQ9GZT3 109 aaKnown RBP11.82□□□□□ -0.52
SDC2-203ENST00000519587 C6orf62Q9GZU0 229 aaPredicted RBP11.82□□□□□ -0.52
SDC2-203ENST00000519587 IFT22Q9H7X7 185 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 TMEM165Q9HC07 324 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 ZNF222Q9UK12 451 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 A3GALT2U3KPV4 340 aa11.82□□□□□ -0.52
SDC2-203ENST00000519587 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
SDC2-203ENST00000519587 A0A0A6YYH2 397 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 A6NJ64 397 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 CEACAM18A8MTB9 384 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 GEMIN2O14893 280 aaKnown RBP11.81□□□□□ -0.52
SDC2-203ENST00000519587 SIGLEC5O15389 551 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 RGS5O15539 181 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 PDCD6O75340 191 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 OR2H2O95918 312 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 APOA1P02647 267 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 DUSP1P28562 367 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 PITPNBP48739 271 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 HOXA4Q00056 320 aaPredicted RBP11.81□□□□□ -0.52
SDC2-203ENST00000519587 SCN1BQ07699 218 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 TAF9Q16594 264 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 LRRC10Q5BKY1 277 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 OR5T2Q8NGG2 359 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 NEIL1Q96FI4 390 aaPredicted RBP11.81□□□□□ -0.52
SDC2-203ENST00000519587 SDSLQ96GA7 329 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 NEDD4LQ96PU5 975 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 LPAR5Q9H1C0 372 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 ATG5Q9H1Y0 275 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 NARFLQ9H6Q4 476 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 COMMD3Q9UBI1 195 aa11.81□□□□□ -0.52
SDC2-203ENST00000519587 SIRPB1O00241 398 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 NDUFB3O43676 98 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 FUT3P21217 361 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 USF1P22415 310 aaPredicted RBP11.8□□□□□ -0.52
SDC2-203ENST00000519587 TALDO1P37837 337 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 RBMXP38159 391 aaKnown RBP11.8□□□□□ -0.52
SDC2-203ENST00000519587 KCNJ3P48549 501 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 CEBPDP49716 269 aaPredicted RBP11.8□□□□□ -0.52
SDC2-203ENST00000519587 COL10A1Q03692 680 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 RBM39Q14498 530 aaKnown RBP11.8□□□□□ -0.52
SDC2-203ENST00000519587 ARL6IP1Q15041 203 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 PAN3Q58A45 887 aaKnown RBP11.8□□□□□ -0.52
SDC2-203ENST00000519587 ATAD3CQ5T2N8 411 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 ZNF788Q6ZQV5 615 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 TMEM185AQ8NFB2 350 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 OR5H6Q8NGV6 325 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 NEK7Q8TDX7 302 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 SLC25A38Q96DW6 304 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 S100A16Q96FQ6 103 aaKnown RBP11.8□□□□□ -0.52
SDC2-203ENST00000519587 Q96MF0 132 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 GAFA1Q96PS6 74 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 CCL13Q99616 98 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 NUDT16L1Q9BRJ7 211 aaKnown RBP11.8□□□□□ -0.52
SDC2-203ENST00000519587 FAM234AQ9H0X4 552 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 ABCG5Q9H222 651 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 MMP27Q9H306 513 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 PATZ1Q9HBE1 687 aaKnown RBP11.8□□□□□ -0.52
SDC2-203ENST00000519587 DIABLOQ9NR28 239 aa11.8□□□□□ -0.52
SDC2-203ENST00000519587 FAM25AB3EWG3 89 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 FAM25CB3EWG5 89 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 FAM25GB3EWG6 89 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 GLAP06280 429 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 BLVRBP30043 206 aaPredicted RBP11.79□□□□□ -0.52
SDC2-203ENST00000519587 S100A5P33763 92 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 VEGFCP49767 419 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 NPY4RP50391 375 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 EFNB2P52799 333 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 CNPY1Q3B7I2 92 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 ESCO2Q56NI9 601 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 NKAPLQ5M9Q1 402 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 Q6P435 159 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 FAM89BQ8N5H3 189 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 CD177Q8N6Q3 437 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 FAM216BQ8N7L0 139 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 OR5D13Q8NGL4 314 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 CLDND2Q8NHS1 167 aa11.79□□□□□ -0.52
SDC2-203ENST00000519587 SNX22Q96L94 193 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms