RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 NXF2Q9GZY0 626 aaKnown RBP3.21□□□□□ -1.9
CHD1-209ENST00000512844 CDC42EP4Q9H3Q1 356 aaKnown RBP3.21□□□□□ -1.9
CHD1-209ENST00000512844 CWH43Q9H720 699 aa3.21□□□□□ -1.9
CHD1-209ENST00000512844 C12orf10Q9HB07 376 aa3.21□□□□□ -1.9
CHD1-209ENST00000512844 ACOT13Q9NPJ3 140 aa3.21□□□□□ -1.9
CHD1-209ENST00000512844 DUX4Q9UBX2 424 aa3.21□□□□□ -1.9
CHD1-209ENST00000512844 OR12D3Q9UGF7 316 aa3.21□□□□□ -1.9
CHD1-209ENST00000512844 TIMM22Q9Y584 194 aa3.21□□□□□ -1.9
CHD1-209ENST00000512844 PALLDQ8WX93 1383 aa3.21□□□□□ -1.9
CHD1-209ENST00000512844 ABCC12Q96J65 1359 aa3.21□□□□□ -1.9
CHD1-209ENST00000512844 XRN1Q8IZH2 1706 aaKnown RBP3.21□□□□□ -1.9
CHD1-209ENST00000512844 MROH7Q68CQ1 1323 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RIMBP3CA6NJZ7 1639 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RIMBP3BA6NNM3 1639 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RIMBP3Q9UFD9 1639 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RGPD1P0DJD0 1748 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 NALCNQ8IZF0 1738 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 IGLV11-55A0A075B6I3 123 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.2□□□□□ -1.9
CHD1-209ENST00000512844 ISPDA4D126 451 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 EFCAB9A8MZ26 197 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 SLC31A2O15432 143 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RAD51CO43502 376 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 SYNGR1O43759 233 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 UGT2B11O75310 529 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 TCRBP04435 133 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 BCHEP06276 602 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 LIMS3P0CW19 117 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 LIMS4P0CW20 117 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 UGT2B7P16662 529 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 TAS2R31P59538 309 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RPS14P62263 151 aaKnown RBP3.2□□□□□ -1.9
CHD1-209ENST00000512844 PAFAH1B2P68402 229 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 CD164Q04900 197 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 DYNC1I2Q13409 638 aaKnown RBP3.2□□□□□ -1.9
CHD1-209ENST00000512844 DEFB116Q30KQ4 102 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 CHRFAM7AQ494W8 412 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 SPIN4Q56A73 249 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 SYPL2Q5VXT5 272 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 TRIQKQ629K1 86 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 MED27Q6P2C8 311 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 CD200R1LQ6Q8B3 271 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 LINC00301Q8NCQ3 95 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 PXT1Q8NFP0 134 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 OR2A1Q8NGT9 310 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 NEK7Q8TDX7 302 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 KCTD4Q8WVF5 259 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 TLCD1Q96CP7 247 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 DGCR14Q96DF8 476 aaKnown RBP3.2□□□□□ -1.9
CHD1-209ENST00000512844 ADTRPQ96IZ2 230 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RBP7Q96R05 134 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 PHB2Q99623 299 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 PDCD1LG2Q9BQ51 273 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 AGMATQ9BSE5 352 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 RIOK2Q9BVS4 552 aaKnown RBP3.2□□□□□ -1.9
CHD1-209ENST00000512844 NEUROG2Q9H2A3 272 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 TRABDQ9H4I3 376 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 LHX9Q9NQ69 397 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 GID8Q9NWU2 228 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 FARSAQ9Y285 508 aaKnown RBP3.2□□□□□ -1.9
CHD1-209ENST00000512844 MMACHCQ9Y4U1 282 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 TUBGCP6Q96RT7 1819 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 CARMIL3Q8ND23 1372 aa3.2□□□□□ -1.9
CHD1-209ENST00000512844 COL22A1Q8NFW1 1626 aaPredicted RBP3.19□□□□□ -1.9
CHD1-209ENST00000512844 SIGLEC1Q9BZZ2 1709 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 FMN2Q9NZ56 1722 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 A0A0D9SFI3 127 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 A0A1B0GV72 72 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 SLC5A10A0PJK1 596 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 SMKR1H3BMG3 65 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 BIRC5O15392 142 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 ERI3O43414 337 aaKnown RBP3.19□□□□□ -1.9
CHD1-209ENST00000512844 MPZL2O60487 215 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 SS18L1O75177 396 aaPredicted RBP3.19□□□□□ -1.9
CHD1-209ENST00000512844 OR2B3O76000 313 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 MPZL1O95297 269 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 MRPL3P09001 348 aaKnown RBP3.19□□□□□ -1.9
CHD1-209ENST00000512844 SNRPAP09012 282 aaKnown RBP3.19□□□□□ -1.9
CHD1-209ENST00000512844 ZNF250P15622 560 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 ZNF823P16415 610 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 PSMB9P28065 219 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 TGFBR2P37173 567 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 CXCL5P42830 114 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 GSSP48637 474 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 RAB7AP51149 207 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 SUB1P53999 127 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD1-209ENST00000512844 DLX6P56179 175 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 LSM6P62312 80 aaKnown RBP3.19□□□□□ -1.9
CHD1-209ENST00000512844 RPL19P84098 196 aaKnown RBP3.19□□□□□ -1.9
CHD1-209ENST00000512844 FAM3AP98173 230 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 RPL18AQ02543 176 aaKnown RBP3.19□□□□□ -1.9
CHD1-209ENST00000512844 GUSBP1Q15486 140 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 SLC9A3R2Q15599 337 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 UBE2SQ16763 222 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 TMEM183BQ1AE95 376 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 TBC1D28Q2M2D7 210 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 OR10J3Q5JRS4 329 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 FAM27D1Q5T7N8 215 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 HACD4Q5VWC8 232 aa3.19□□□□□ -1.9
CHD1-209ENST00000512844 TMEM179Q6ZVK1 233 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms