RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PLA1AQ53H76 456 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 LDLRAD2Q5SZI1 272 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 SHISA2Q6UWI4 295 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 AHSA2Q719I0 299 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 DYNAPQ8N1N2 210 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 ZNF485Q8NCK3 441 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 BPIFB6Q8NFQ5 453 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 OR4F5Q8NH21 305 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 GPR148Q8TDV2 347 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 NRG4Q8WWG1 115 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 ZNF714Q96N38 554 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 NR1H4Q96RI1 486 aaPredicted RBP10.8□□□□□ -0.68
RNF4-215ENST00000511843 SSX3Q99909 188 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 HEXA-AS1Q9H8Q6 139 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 BABAM2Q9NXR7 383 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 VPREB3Q9UKI3 123 aa10.8□□□□□ -0.68
RNF4-215ENST00000511843 hCG_1809904A0A1W2PP81 198 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 A0A1W2PPE2 198 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 A0A1W2PR64 198 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 A0A1W2PRV1 198 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 BTBD17A6NE02 478 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 ERICH4A6NGS2 130 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 HSPB6O14558 160 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 SH2D1BO14796 132 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 OGG1O15527 345 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 MMP23AO75900 390 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 NDUFA7O95182 113 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 IGHV1-8P0DP01 117 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 ZNF44P15621 663 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 OR3A4PP47883 348 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 CCDC58Q4VC31 144 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 ZNF529Q6P280 563 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 Q6P435 159 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 BAIAP2L2Q6UXY1 529 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 Q6ZSV7 163 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 SAXO1Q8IYX7 474 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 OR10K1Q8NGX5 313 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 TNFAIP8L1Q8WVP5 186 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 WFDC12Q8WWY7 111 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 TMEM106AQ96A25 262 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 SMIM19Q96E16 107 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 GPER1Q99527 375 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 FAM192AQ9GZU8 254 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 BEX1Q9HBH7 125 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 ZNF581Q9P0T4 197 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 PSORS1C1Q9UIG5 152 aa10.79□□□□□ -0.68
RNF4-215ENST00000511843 PKD1L1Q8TDX9 2849 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 A0A0G2JK05 382 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 hADV38S2A0JD32 116 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 FAM172BPA6NC97 362 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 MAGEA13PA6NCF6 341 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 EFCAB10A6NFE3 127 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 MGST3O14880 152 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 ALX3O95076 343 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 ARG1P05089 322 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 JUNBP17275 347 aaPredicted RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 C21orf33P30042 268 aaPredicted RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 GLIPR1P48060 266 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 P2RX3P56373 397 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 LGALS4P56470 323 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 KRTAP10-3P60369 221 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 MEF2CQ06413 473 aaPredicted RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 AESQ08117 197 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 DYNC1I2Q13409 638 aaKnown RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 ATXN7L3Q14CW9 347 aaPredicted RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 PIGYQ3MUY2 71 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 PRAMEF5Q5TYX0 476 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 OLFML2AQ68BL7 652 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 DMKNQ6E0U4 476 aaPredicted RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 DHRS7BQ6IAN0 325 aaPredicted RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 TRAPPC6BQ86SZ2 158 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 ZSCAN4Q8NAM6 433 aaPredicted RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 OR52N1Q8NH53 320 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 LINC01006Q8NI28 216 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 HAVCR2Q8TDQ0 301 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 FBLIM1Q8WUP2 373 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 TFAP2CQ92754 450 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 GHSRQ92847 366 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 DCLRE1BQ9H816 532 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 SEBOXQ9HB31 216 aaPredicted RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 CHCHD3Q9NX63 227 aaKnown RBP10.78□□□□□ -0.68
RNF4-215ENST00000511843 GLS2Q9UI32 602 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 ZNF281Q9Y2X9 895 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 MMP24Q9Y5R2 645 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 LINC00312Q9Y6C7 94 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 HSPE1-MOB4S4R3N1 261 aa10.78□□□□□ -0.68
RNF4-215ENST00000511843 A0A1W2PPK0 400 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 CLPSL1A2RUU4 121 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 POM121CA8CG34 1229 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 ODF3BA8MYP8 253 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 SLC33A1O00400 549 aaPredicted RBP10.77□□□□□ -0.69
RNF4-215ENST00000511843 CDRT1O95170 752 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 CD2P06729 351 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 GDNFP39905 211 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 RAB13P51153 203 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 AQP4P55087 323 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 RPS11P62280 158 aaKnown RBP eCLIP10.77□□□□□ -0.69
RNF4-215ENST00000511843 SLC34A1Q06495 639 aa10.77□□□□□ -0.69
RNF4-215ENST00000511843 MED21Q13503 144 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms