RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SULT1B1O43704 296 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 ALX3O95076 343 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 OR2H2O95918 312 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 HCKP08631 526 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 LIMS3P0CW19 117 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 LIMS4P0CW20 117 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 GABRA5P31644 462 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 ASPHD2Q6ICH7 369 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 SAXO1Q8IYX7 474 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 DYNAPQ8N1N2 210 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 PIFOQ8TCI5 191 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 HAVCR2Q8TDQ0 301 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 TSEN15Q8WW01 171 aaKnown RBP18.6■□□□□ 0.57
SNF8-209ENST00000510558 FOXRED1Q96CU9 486 aaPredicted RBP18.6■□□□□ 0.57
SNF8-209ENST00000510558 JAM3Q9BX67 310 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 RHOFQ9HBH0 211 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 RAB18Q9NP72 206 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 FGF20Q9NP95 211 aaPredicted RBP18.6■□□□□ 0.57
SNF8-209ENST00000510558 FBLN5Q9UBX5 448 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 DHDHQ9UQ10 334 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 PCDHGB5Q9Y5G0 923 aa18.6■□□□□ 0.57
SNF8-209ENST00000510558 ERP29P30040 261 aaKnown RBP18.59■□□□□ 0.57
SNF8-209ENST00000510558 P2RX3P56373 397 aa18.59■□□□□ 0.57
SNF8-209ENST00000510558 DYNC1I2Q13409 638 aaKnown RBP18.59■□□□□ 0.57
SNF8-209ENST00000510558 PLA1AQ53H76 456 aa18.59■□□□□ 0.57
SNF8-209ENST00000510558 LDLRAD2Q5SZI1 272 aa18.59■□□□□ 0.57
SNF8-209ENST00000510558 SESN1Q9Y6P5 492 aa18.59■□□□□ 0.57
SNF8-209ENST00000510558 VGLL3A8MV65 326 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 WIPF1O43516 503 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 CHST1O43916 411 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 TMEM225BP0DP42 221 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 GTF2A1P52655 376 aaPredicted RBP18.58■□□□□ 0.56
SNF8-209ENST00000510558 ZP1P60852 638 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 KISS1Q15726 138 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 LIAT1Q6ZQX7 453 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 TRAPPC6BQ86SZ2 158 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 OR4C13Q8NGP0 309 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 MALSU1Q96EH3 234 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 RANBP3Q9H6Z4 567 aaPredicted RBP18.58■□□□□ 0.56
SNF8-209ENST00000510558 SIGLEC9Q9Y336 463 aa18.58■□□□□ 0.56
SNF8-209ENST00000510558 CLIC3O95833 236 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 ZNF44P15621 663 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 LMO1P25800 156 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 KIR2DS4P43632 304 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 IL18R1Q13478 541 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 FAM189A2Q15884 450 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 SSX2Q16385 188 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 LRRC36Q1X8D7 754 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 ZNF691Q5VV52 312 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 CNIH3Q8TBE1 160 aa18.57■□□□□ 0.56
SNF8-209ENST00000510558 RGP1Q92546 391 aaPredicted RBP18.57■□□□□ 0.56
SNF8-209ENST00000510558 UBE2J1Q9Y385 318 aaPredicted RBP18.57■□□□□ 0.56
SNF8-209ENST00000510558 TET2Q6N021 2002 aaPredicted RBP18.56■□□□□ 0.56
SNF8-209ENST00000510558 IGHV2-26A0A0B4J1V2 119 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 DCKP27707 260 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 ETV1P50549 477 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 RAB13P51153 203 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 EFNB2P52799 333 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 SCN1BQ07699 218 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 XAF1Q6GPH4 301 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 Q6P435 159 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 NPFFR1Q9GZQ6 430 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 TMEM133Q9H2Q1 129 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 ABCB10Q9NRK6 738 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 MEGF8Q7Z7M0 2845 aa18.56■□□□□ 0.56
SNF8-209ENST00000510558 TRGV10A0A0A0MS01 117 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 FUOMA2VDF0 154 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 MEGF11A6BM72 1044 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 MMP23AO75900 390 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 RAB3AP20336 220 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 SOX2P48431 317 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 AESQ08117 197 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 CDK5R1Q15078 307 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 CCDC58Q4VC31 144 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 MINOS1Q5TGZ0 78 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 OR2G6Q5TZ20 316 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 ZNF529Q6P280 563 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 RPL22L1Q6P5R6 122 aaKnown RBP18.55■□□□□ 0.56
SNF8-209ENST00000510558 CHST4Q8NCG5 386 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 OR51A2Q8NGJ7 313 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 OR2T6Q8NHC8 308 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 RPS4Y2Q8TD47 263 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 CYGBQ8WWM9 190 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 CLEC7AQ9BXN2 247 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 MMP27Q9H306 513 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 TCF19Q9Y242 345 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 MINOS1-NBL1R4GNA1 71 aa18.55■□□□□ 0.56
SNF8-209ENST00000510558 A0A0G2JK05 382 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 IRGMA1A4Y4 181 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 CSN2P05814 226 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 GLIPR1P48060 266 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 TTC23Q5W5X9 447 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 TMPRSS11AQ6ZMR5 421 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 NDNFQ8TB73 568 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 GPR148Q8TDV2 347 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 CPNE2Q96FN4 548 aaPredicted RBP18.54■□□□□ 0.56
SNF8-209ENST00000510558 NKX3-1Q99801 234 aaPredicted RBP18.54■□□□□ 0.56
SNF8-209ENST00000510558 CDCA4Q9BXL8 241 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 GAL3ST2Q9H3Q3 398 aa18.54■□□□□ 0.56
SNF8-209ENST00000510558 HILPDAQ9Y5L2 63 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms