RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 RNASEK-C17orf49H0YIS7 233 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 ENSAO43768 121 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 KNG1P01042 644 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF20P17024 532 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 MYL12AP19105 171 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 PAX6P26367 422 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 GDNFP39905 211 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 FUT6P51993 359 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 COL10A1Q03692 680 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 MZT1Q08AG7 82 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 ACSM1Q08AH1 577 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 PDZK1IP1Q13113 114 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 CNN3Q15417 329 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 MICBQ29980 383 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 CCDC58Q4VC31 144 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 FBLN7Q53RD9 439 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 Q6P435 159 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 TMEM91Q6ZNR0 172 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 Q6ZPA2 131 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 C9orf139Q6ZV77 190 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 LRRTM1Q86UE6 522 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF573Q86YE8 665 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 TPRX1Q8N7U7 411 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 SIGLECL1Q8N7X8 197 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 CCDC54Q8NEL0 328 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 OR4S1Q8NGB4 309 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 OR10K1Q8NGX5 313 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 TMEM106AQ96A25 262 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 TMIGD2Q96BF3 282 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 BORCS8Q96FH0 119 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 COQ2Q96H96 371 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF184Q99676 751 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 DNTTIP1Q9H147 329 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 TRIM36Q9NQ86 728 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 SIRT7Q9NRC8 400 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 SLC25A10Q9UBX3 287 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 FBLN5Q9UBX5 448 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 DHDHQ9UQ10 334 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 AUP1Q9Y679 476 aa5.9□□□□□ -1.46
TOPBP1-207ENST00000509162 CENPVL3A0A0U1RRI6 287 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 IRGMA1A4Y4 181 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF879B4DU55 563 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 PTGES3LE9PB15 166 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 H0YHG0 523 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 MYL12BO14950 172 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 GPX5O75715 221 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 NXPH2O95156 264 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 HAND1O96004 215 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 CD1AP06126 327 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 OCM2P0CE71 109 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 PRKACAP17612 351 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 CELP19835 753 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 PCMT1P22061 227 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 GATA3P23771 443 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 PRDX2P32119 198 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 GABRA2P47869 451 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 RBP2P50120 134 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 NPY4RP50391 375 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 CAV3P56539 151 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 HILS1P60008 231 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 ARF6P62330 175 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 IL13RA1P78552 427 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 MRPL28Q13084 256 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 KISS1Q15726 138 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 TBCEQ15813 527 aaPredicted RBP5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 SMIM21Q3B7S5 101 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 PIGYQ3MUY2 71 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 Q499Y3 187 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 METTL11BQ5VVY1 283 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 ASCL4Q6XD76 172 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 TMPRSS11AQ6ZMR5 421 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 VMO1Q7Z5L0 202 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 EGFL6Q8IUX8 553 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 PDZD9Q8IXQ8 264 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 STX19Q8N4C7 294 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 TMEM185AQ8NFB2 350 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 Q8NFD4 153 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 OR4M1Q8NGD0 313 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 OR4D6Q8NGJ1 314 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 ZNF671Q8TAW3 534 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 GPR148Q8TDV2 347 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 EMG1Q92979 244 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 WDFY2Q96P53 400 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 DUX5Q96PT3 197 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 HIST1H2AAQ96QV6 131 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 JMJD8Q96S16 334 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 CHST6Q9GZX3 395 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 COMMD4Q9H0A8 199 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 VCXQ9H320 206 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 HMG20AQ9NP66 347 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 NOX4Q9NPH5 578 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 DNAJB11Q9UBS4 358 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 OR14J1Q9UGF5 321 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 RAB26Q9ULW5 256 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 POLDIP2Q9Y2S7 368 aa5.89□□□□□ -1.47
TOPBP1-207ENST00000509162 TRAV24A0A0B4J272 114 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 A0A0U1RQK1 487 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 DNAJC9-AS1A6NH13 148 aa5.88□□□□□ -1.47
TOPBP1-207ENST00000509162 K7N7A8 449 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms