RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 GPM6AP51674 278 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 BMXP51813 675 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 CAPZA1P52907 286 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 FAM3BP58499 235 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 FABP5Q01469 135 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 CFHR3Q02985 330 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 IL24Q13007 206 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF154Q13106 437 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 GPR176Q14439 515 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 UBE2V2Q15819 145 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 SSX1Q16384 188 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 GLT8D1Q68CQ7 371 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 DNM1P46Q6ZS02 220 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 CEACAM19Q7Z692 300 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 TPRA1Q86W33 373 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF575Q86XF7 245 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 MKXQ8IYA7 352 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 SAXO1Q8IYX7 474 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 MUC20Q8N307 709 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 PNLDC1Q8NA58 520 aaKnown RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 PXT1Q8NFP0 134 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR10AD1Q8NGE0 317 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR13F1Q8NGS4 319 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 HPSE2Q8WWQ2 592 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 NRGNQ92686 78 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 C12orf43Q96C57 262 aaKnown RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 PERPQ96FX8 193 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 BCL7BQ9BQE9 202 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 UQCC2Q9BRT2 126 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMED9Q9BVK6 235 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 SEBOXQ9HB31 216 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 NOX4Q9NPH5 578 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 GPR173Q9NS66 373 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 SNTG1Q9NSN8 517 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM106BQ9NUM4 274 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 RNF7Q9UBF6 113 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 GHRLQ9UBU3 117 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 NPTNQ9Y639 398 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 VPS13CQ709C8 3753 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 WNK2Q9Y3S1 2297 aa4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB1P44-201ENST00000508597 TEX15Q9BXT5 2789 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 TRAV38-1A0A0B4J264 116 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 IGKV1-9A0A0C4DH69 117 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 FAM230AA0A1W2PPH8 454 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 A6NLC8 198 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 SRRM5B3KS81 715 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM178BH3BS89 294 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 H7C1Q1 480 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 MAST4O15021 2626 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 PIN1P1O15428 100 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 SSX4O60224 188 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 RP2O75695 350 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 LHBP01229 141 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 TFAP2AP05549 437 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 HEXAP06865 529 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 HCKP08631 526 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 UBBP0CG47 229 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 MUC1P15941 1255 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 CD36P16671 472 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 MYL9P24844 172 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 COL8A2P25067 703 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF93P35789 620 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 GPR6P46095 362 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 HAAOP46952 286 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 ALDH3B2P48448 385 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 MTCP1P56278 107 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 RPL15P61313 204 aaKnown RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 RPS25P62851 125 aaKnown RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 PDZK1IP1Q13113 114 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 KISS1Q15726 138 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 FAM189A2Q15884 450 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 CLEC12BQ2HXU8 276 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM155Q4W5P6 130 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 CEP78Q5JTW2 689 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 Q5PR19 223 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 FIP1L1Q6UN15 594 aaKnown RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM91Q6ZNR0 172 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 GPR141Q7Z602 305 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 ANKRD13BQ86YJ7 626 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 CROCCP3Q8IVE0 287 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 C11orf53Q8IXP5 236 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZCCHC24Q8N2G6 241 aaKnown RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 SPICQ8N5J4 248 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 SCCPDHQ8NBX0 429 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR13C9Q8NGT0 318 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 AQP3Q92482 292 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 CCL17Q92583 94 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 GTF3AQ92664 365 aaKnown RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM203Q969S6 136 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 YIPF6Q96EC8 236 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 KCTD7Q96MP8 289 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 GPER1Q99527 375 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 S100A13Q99584 98 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 AKAP9Q99996 3911 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 PIMREGQ9BSJ6 248 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 DNTTIP1Q9H147 329 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 METTL17Q9H7H0 456 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 C1orf123Q9NWV4 160 aa4.59□□□□□ -1.67
HMGB1P44-201ENST00000508597 TAS2R4Q9NYW5 299 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms