RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 OR51A4Q8NGJ6 313 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 C10orf35Q96D05 121 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 SNX22Q96L94 193 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 FAM192AQ9GZU8 254 aa13.12□□□□□ -0.31
LMNA-222ENST00000508500 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
LMNA-222ENST00000508500 EXOGQ9Y2C4 368 aaKnown RBP13.12□□□□□ -0.31
LMNA-222ENST00000508500 IGKV1-12A0A0C4DH73 117 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 SMIM31A0A1B0GVY4 71 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 PSPNO60542 156 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 IGKV1D-12P01611 117 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 ISG15P05161 165 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 ZNF728P0DKX0 622 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 ATF1P18846 271 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 BCL3P20749 454 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 DCKP27707 260 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 DUSP1P28562 367 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 GABRA5P31644 462 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 KIR2DS4P43632 304 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 EDDM3BP56851 147 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 ZNF91Q05481 1191 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 ST3GAL4Q11206 333 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 AHSA2Q719I0 299 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 FAM220AQ7Z4H9 259 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 DNAAF1Q8NEP3 725 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 PP6455Q8WZ26 134 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 EMG1Q92979 244 aaKnown RBP13.11□□□□□ -0.31
LMNA-222ENST00000508500 FGGYQ96C11 551 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 TMEM80Q96HE8 168 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 ZNF649Q9BS31 505 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 JAM3Q9BX67 310 aa13.11□□□□□ -0.31
LMNA-222ENST00000508500 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
LMNA-222ENST00000508500 FGF20Q9NP95 211 aaPredicted RBP13.11□□□□□ -0.31
LMNA-222ENST00000508500 PAK1IP1Q9NWT1 392 aaPredicted RBP13.11□□□□□ -0.31
LMNA-222ENST00000508500 OR4C45A6NMZ5 311 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 FADS2O95864 444 aaKnown RBP13.1□□□□□ -0.31
LMNA-222ENST00000508500 HAND1O96004 215 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 SERPINA3P01011 423 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 HTR1AP08908 422 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 IGHV1-8P0DP01 117 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 AZGP1P25311 298 aaKnown RBP13.1□□□□□ -0.31
LMNA-222ENST00000508500 RBP2P50120 134 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 ATP1B3P54709 279 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 CNN3Q15417 329 aaKnown RBP13.1□□□□□ -0.31
LMNA-222ENST00000508500 TBCEQ15813 527 aaPredicted RBP13.1□□□□□ -0.31
LMNA-222ENST00000508500 PLA1AQ53H76 456 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 TMEM244Q5VVB8 128 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 ZNF626Q68DY1 528 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 UTS2BQ765I0 119 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 OR4S1Q8NGB4 309 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 OR11H6Q8NGC7 330 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 LGALS12Q96DT0 336 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
LMNA-222ENST00000508500 CHST6Q9GZX3 395 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 DIMT1Q9UNQ2 313 aaKnown RBP13.1□□□□□ -0.31
LMNA-222ENST00000508500 FOXJ3Q9UPW0 622 aa13.1□□□□□ -0.31
LMNA-222ENST00000508500 TRBV2A0A0J9YWF9 115 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 hCG_1809904A0A1W2PP81 198 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 A0A1W2PPE2 198 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 A0A1W2PR64 198 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 A0A1W2PRV1 198 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 DAPL1A0PJW8 107 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 VGLL3A8MV65 326 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 MMP23AO75900 390 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 ARG1P05089 322 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 POU3F4P49335 361 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 EDDM3AQ14507 147 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 IRF3Q14653 427 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 ZNF146Q15072 292 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 GDPD3Q7L5L3 318 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 KCTD20Q7Z5Y7 419 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 FAM58AQ8N1B3 248 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 RFT1Q96AA3 541 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 SPACA5Q96QH8 159 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 CCDC90BQ9GZT6 254 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 ISG20L2Q9H9L3 353 aaKnown RBP13.09□□□□□ -0.31
LMNA-222ENST00000508500 INPP5EQ9NRR6 644 aa13.09□□□□□ -0.31
LMNA-222ENST00000508500 EXOSC1Q9Y3B2 195 aaKnown RBP13.09□□□□□ -0.31
LMNA-222ENST00000508500 J3QLW9 94 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 RBP4P02753 201 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 MT-ND2P03891 347 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 ZNF19P17023 458 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 OR3A1P47881 315 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 CCR9P51686 369 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 SNU13P55769 128 aaKnown RBP13.08□□□□□ -0.32
LMNA-222ENST00000508500 MTCP1P56278 107 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 LGALS4P56470 323 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 ACTC1P68032 377 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 ACTA1P68133 377 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 EMX1Q04741 257 aaPredicted RBP13.08□□□□□ -0.32
LMNA-222ENST00000508500 MEF2CQ06413 473 aaPredicted RBP13.08□□□□□ -0.32
LMNA-222ENST00000508500 PDZK1IP1Q13113 114 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 UBE2UQ5VVX9 321 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 BAIAP2L2Q6UXY1 529 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 LHFPL3Q86UP9 236 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 ACBD7Q8N6N7 88 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 FAM110DQ8TAY7 271 aaPredicted RBP13.08□□□□□ -0.32
LMNA-222ENST00000508500 CFHR4Q92496 578 aa13.08□□□□□ -0.32
LMNA-222ENST00000508500 C4orf36Q96KX1 117 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms