RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CRIP3Q6Q6R5 217 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 TCF23Q7RTU1 214 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 SERPINA12Q8IW75 414 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 PARP16Q8N5Y8 322 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 ZNF555Q8NEP9 628 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 OR4S1Q8NGB4 309 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 OR11H6Q8NGC7 330 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 OR52I1Q8NGK6 324 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 OR5D14Q8NGL3 314 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 OR5AK2Q8NH90 309 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 HAVCR2Q8TDQ0 301 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 TSEN15Q8WW01 171 aaKnown RBP6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 APH1BQ8WW43 257 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 STMN2Q93045 179 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 FOXRED1Q96CU9 486 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 RDH12Q96NR8 316 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 PDCD1LG2Q9BQ51 273 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 ZNF649Q9BS31 505 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 RHOFQ9HBH0 211 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 EXOSC4Q9NPD3 245 aaKnown RBP6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 MRPS18AQ9NVS2 196 aaKnown RBP6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 SMPD3Q9NY59 655 aaPredicted RBP6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 FBLN5Q9UBX5 448 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 PCDHGB5Q9Y5G0 923 aa6.87□□□□□ -1.31
HMGXB4-207ENST00000498212 FUOMA2VDF0 154 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 VGLL3A8MV65 326 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 E9PI62 339 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 ALX3O95076 343 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 OR2H2O95918 312 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 TMEM225BP0DP42 221 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 ZNF44P15621 663 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 ERP29P30040 261 aaKnown RBP6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 OR3A1P47881 315 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 P2RX3P56373 397 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 KISS1Q15726 138 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 FAM189A2Q15884 450 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 SSX2Q16385 188 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 SMN1Q16637 294 aaKnown RBP6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 PLA1AQ53H76 456 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 LPCAT4Q643R3 524 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 RNF144BQ7Z419 303 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 TRAPPC6BQ86SZ2 158 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 SAXO1Q8IYX7 474 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 DYNAPQ8N1N2 210 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 OR4C13Q8NGP0 309 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 PIFOQ8TCI5 191 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 MALSU1Q96EH3 234 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 NPFFR1Q9GZQ6 430 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 MMP27Q9H306 513 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 RANBP3Q9H6Z4 567 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 FGF20Q9NP95 211 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 ABCB10Q9NRK6 738 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 DHDHQ9UQ10 334 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 UBE2J1Q9Y385 318 aaPredicted RBP6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 SESN1Q9Y6P5 492 aa6.86□□□□□ -1.31
HMGXB4-207ENST00000498212 TRGV10A0A0A0MS01 117 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 IGHV2-26A0A0B4J1V2 119 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 MAGEB3O15480 346 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 CHST1O43916 411 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 WBP4O75554 376 aaKnown RBP6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 LIMS3P0CW19 117 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 LIMS4P0CW20 117 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 LMO1P25800 156 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 KIR2DS4P43632 304 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 RAB13P51153 203 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 GTF2A1P52655 376 aaPredicted RBP6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 EFNB2P52799 333 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 ZP1P60852 638 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 SCN1BQ07699 218 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 LRRC36Q1X8D7 754 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 LDLRAD2Q5SZI1 272 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 MINOS1Q5TGZ0 78 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 ZNF691Q5VV52 312 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 C11orf88Q6PI97 169 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 DTX3Q8N9I9 347 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 CHST4Q8NCG5 386 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 OR2T6Q8NHC8 308 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 NDNFQ8TB73 568 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 CNIH3Q8TBE1 160 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 RPS4Y2Q8TD47 263 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 CPNE2Q96FN4 548 aaPredicted RBP6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 NKX3-1Q99801 234 aaPredicted RBP6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 JAM3Q9BX67 310 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 CDCA4Q9BXL8 241 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 CLEC7AQ9BXN2 247 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 TMEM133Q9H2Q1 129 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 GAL3ST2Q9H3Q3 398 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 PITPNC1Q9UKF7 332 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 TCF19Q9Y242 345 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 SIGLEC9Q9Y336 463 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 HILPDAQ9Y5L2 63 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 MINOS1-NBL1R4GNA1 71 aa6.85□□□□□ -1.31
HMGXB4-207ENST00000498212 A0A0G2JK05 382 aa6.84□□□□□ -1.31
HMGXB4-207ENST00000498212 IRGMA1A4Y4 181 aa6.84□□□□□ -1.31
HMGXB4-207ENST00000498212 SLC33A1O00400 549 aaPredicted RBP6.84□□□□□ -1.31
HMGXB4-207ENST00000498212 DEGS1O15121 323 aa6.84□□□□□ -1.31
HMGXB4-207ENST00000498212 KCNAB3O43448 404 aa6.84□□□□□ -1.31
HMGXB4-207ENST00000498212 MMP23AO75900 390 aa6.84□□□□□ -1.31
HMGXB4-207ENST00000498212 CLIC3O95833 236 aa6.84□□□□□ -1.31
HMGXB4-207ENST00000498212 TSPAN15O95858 294 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms