RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 BPIFB2Q8N4F0 458 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 ASCC1Q8N9N2 400 aaKnown RBP9.25□□□□□ -0.93
ERCC8-208ENST00000497892 TNFAIP8L1Q8WVP5 186 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 UFD1Q92890 307 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 SLC6A7Q99884 636 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 TMED9Q9BVK6 235 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 FAM192AQ9GZU8 254 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 ISYNA1Q9NPH2 558 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 C19orf12Q9NSK7 152 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 ONECUT1Q9UBC0 465 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 ZNF69Q9UC07 566 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 FOXJ3Q9UPW0 622 aa9.25□□□□□ -0.93
ERCC8-208ENST00000497892 IGHV3OR16-10A0A075B7F0 116 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 A0A0A6YYJ9 748 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 A0A1W2PPK0 400 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 TMEM82A0PJX8 343 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 M0R1W7 72 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 RRP9O43818 475 aaKnown RBP9.24□□□□□ -0.93
ERCC8-208ENST00000497892 MRPS14O60783 128 aaKnown RBP9.24□□□□□ -0.93
ERCC8-208ENST00000497892 SC5DO75845 299 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 HSMCR30P0CW71 290 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 CALCBP10092 127 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 CPEP16870 476 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 FPR2P25090 351 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 DUSP1P28562 367 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 TGFBR2P37173 567 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 PTGFRP43088 359 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 MTNR1BP49286 362 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 BMXP51813 675 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 SNU13P55769 128 aaKnown RBP9.24□□□□□ -0.93
ERCC8-208ENST00000497892 RPL31P62899 125 aaKnown RBP9.24□□□□□ -0.93
ERCC8-208ENST00000497892 INSL4Q14641 139 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 PDCD1Q15116 288 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 ACSM3Q53FZ2 586 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 GPR157Q5UAW9 335 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 LIPKQ5VXJ0 399 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 C17orf107Q6ZR85 190 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 C1orf122Q6ZSJ8 110 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 USP43Q70EL4 1123 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 ZNF367Q7RTV3 350 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 SATL1Q86VE3 508 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 FAM185AQ8N0U4 392 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 Q8N7P7 452 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 Q8NFD4 153 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 ZNF418Q8TF45 676 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-208ENST00000497892 WFDC12Q8WWY7 111 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 C22orf15Q8WYQ4 148 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 SNX22Q96L94 193 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 MGLLQ99685 303 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 NKX3-1Q99801 234 aaPredicted RBP9.24□□□□□ -0.93
ERCC8-208ENST00000497892 SUCNR1Q9BXA5 334 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 EXOSC4Q9NPD3 245 aaKnown RBP9.24□□□□□ -0.93
ERCC8-208ENST00000497892 NOX4Q9NPH5 578 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 ACOT13Q9NPJ3 140 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 IL36GQ9NZH8 169 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 GLS2Q9UI32 602 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 GSTK1Q9Y2Q3 226 aa9.24□□□□□ -0.93
ERCC8-208ENST00000497892 CENPVL3A0A0U1RRI6 287 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 PSPNO60542 156 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 PSMA1P25786 263 aaKnown RBP9.23□□□□□ -0.93
ERCC8-208ENST00000497892 LMO1P25800 156 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 OR3A1P47881 315 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 BPIFB3P59826 476 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 HILS1P60008 231 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 RSU1Q15404 277 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 FAM27D1Q5T7N8 215 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 TMEM200BQ69YZ2 307 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 METAP1DQ6UB28 335 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-208ENST00000497892 UNQ9370/PRO34162Q6UXP9 181 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 BRD3OSQ6XYD6 125 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 GDPD3Q7L5L3 318 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 VMO1Q7Z5L0 202 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 LYPD6Q86Y78 171 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 CDH26Q8IXH8 852 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 BCL6BQ8N143 479 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-208ENST00000497892 NKAIN3Q8N8D7 197 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 OR51T1Q8NGJ9 327 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 PHYHIPQ92561 330 aa9.23□□□□□ -0.93
ERCC8-208ENST00000497892 YTHDF1Q9BYJ9 559 aaKnown RBP9.23□□□□□ -0.93
ERCC8-208ENST00000497892 MS4A7Q9GZW8 240 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-208ENST00000497892 METTL8Q9H825 291 aaKnown RBP9.23□□□□□ -0.93
ERCC8-208ENST00000497892 UNKLQ9H9P5 680 aaKnown RBP9.23□□□□□ -0.93
ERCC8-208ENST00000497892 A0A1W2PPH5 198 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 SIRPB1O00241 398 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 SH2D1BO14796 132 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 CDRT1O95170 752 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 VENTXO95231 258 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 OR2H2O95918 312 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 MAS1P04201 325 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 GABRR1P24046 479 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 GP2P55259 537 aaKnown RBP9.22□□□□□ -0.93
ERCC8-208ENST00000497892 RPS25P62851 125 aaKnown RBP9.22□□□□□ -0.93
ERCC8-208ENST00000497892 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
ERCC8-208ENST00000497892 EMX1Q04741 257 aaPredicted RBP9.22□□□□□ -0.93
ERCC8-208ENST00000497892 BLMHQ13867 455 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 TRAM1Q15629 374 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 GRK1Q15835 563 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 NHLRC3Q5JS37 347 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 Q6P435 159 aa9.22□□□□□ -0.93
ERCC8-208ENST00000497892 PHC2Q8IXK0 858 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms