RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 RBM39Q14498 530 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 FAM201AQ5SY85 155 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 SFRP4Q6FHJ7 346 aaPredicted RBP16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 CD177Q8N6Q3 437 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 BOLLQ8N9W6 283 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 NEIL1Q96FI4 390 aaPredicted RBP16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 S100A16Q96FQ6 103 aaKnown RBP16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 C1orf159Q96HA4 380 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 BANF2Q9H503 90 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 POLR3KQ9Y2Y1 108 aaPredicted RBP16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 ITPR2Q14571 2701 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 POLQO75417 2590 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 PRRC2AP48634 2157 aaKnown RBP16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 A0A096LNT2 108 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 GEMIN2O14893 280 aaKnown RBP16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 PDCD6O75340 191 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 OR2H2O95918 312 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 MNDAP41218 407 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 CARTPTQ16568 116 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 TAF9Q16594 264 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 PIGYQ3MUY2 71 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 OR10K2Q6IF99 312 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 MCFD2Q8NI22 146 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 C15orf40Q8WUR7 153 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 SLC25A38Q96DW6 304 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 WDFY2Q96P53 400 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 GAFA1Q96PS6 74 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 DIABLOQ9NR28 239 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 MAB21L2Q9Y586 359 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 PEX16Q9Y5Y5 336 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 TACC2O95359 2948 aa16.46■□□□□ 0.23
SCAMP3-209ENST00000497470 IGHV4-30-2A0A087WSY4 118 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 FUOMA2VDF0 154 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 A8MXK9 166 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 ECDO95905 644 aaPredicted RBP16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 IGHV2-5P01817 119 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 USF1P22415 310 aaPredicted RBP16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 CHATP28329 748 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 PITPNBP48739 271 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 LMO4P61968 165 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 SAMD12Q8N8I0 201 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 DEFB108BQ8NET1 73 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 OR8B3Q8NGG8 313 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 OR5H6Q8NGV6 325 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 OR10R2Q8NGX6 335 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 NEDD4LQ96PU5 975 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 OR8B2Q96RD0 313 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 PTTG2Q9NZH5 202 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 PCDHB10Q9UN67 800 aa16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 FLNBO75369 2602 aaKnown RBP16.45■□□□□ 0.22
SCAMP3-209ENST00000497470 A0A0B4J203 849 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 TRAV24A0A0B4J272 114 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 SERPINE3A8MV23 424 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 SLC33A1O00400 549 aaPredicted RBP16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 MGST3O14880 152 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 ADAM20O43506 726 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 XRCC3O43542 346 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 OR7C1O76099 320 aaPredicted RBP16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 GYPAP02724 150 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 ZNF44P15621 663 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 IKZF1Q13422 519 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 CNPY1Q3B7I2 92 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 LRRC10Q5BKY1 277 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 SIGIRRQ6IA17 410 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 ZNF841Q6ZN19 808 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 C17orf107Q6ZR85 190 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 OR8H2Q8N162 312 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 GAPTQ8N292 157 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 PHF21AQ96BD5 680 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 SEH1LQ96EE3 360 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 DCUN1D5Q9BTE7 237 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 RIMS4Q9H426 269 aaPredicted RBP16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 IL36RNQ9UBH0 155 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 COMMD3Q9UBI1 195 aa16.44■□□□□ 0.22
SCAMP3-209ENST00000497470 PDZD2O15018 2839 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 IGHV3OR15-7A0A075B7D8 119 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 PPIAL4CA0A0B4J2A2 164 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 ISPDA4D126 451 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 MCRIP1C9JLW8 97 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 H7C1Q1 480 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 TMPRSS2O15393 492 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 NDUFB3O43676 98 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 TK1P04183 234 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 MELTFP08582 738 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 GSTP1P09211 210 aaKnown RBP16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 BLVRBP30043 206 aaPredicted RBP16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 GABRA2P47869 451 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 EFNB2P52799 333 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 TMEM50BP56557 158 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 COL10A1Q03692 680 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 AVPI1Q5T686 147 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 BAIAP2L2Q6UXY1 529 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 CMTM4Q8IZR5 234 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 OR5T2Q8NGG2 359 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 CLDND2Q8NHS1 167 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 SHARPINQ9H0F6 387 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 ATG5Q9H1Y0 275 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 LPAR3Q9UBY5 353 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 OR14J1Q9UGF5 321 aa16.43■□□□□ 0.22
SCAMP3-209ENST00000497470 TRBV23-1A0A0A0MS06 115 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms