RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 C11orf42Q8N5U0 333 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 FADS6Q8N9I5 356 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 OR14L1PQ8NHC6 308 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 TERB2Q8NHR7 220 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 MFSD8Q8NHS3 518 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 ONECUT1Q9UBC0 465 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 URGCP-MRPS24S4R325 110 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 V9GYH0 126 aa5.38□□□□□ -1.55
SSBP1-213ENST00000496622 LOC105371242A0A075B767 164 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 LRRC3CA6NJW4 275 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 M0QXV9 152 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 LMX1BO60663 402 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SC5DO75845 299 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 CNIH1O95406 144 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 MAS1P04201 325 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 TBPP20226 339 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 CLDN15P56746 228 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 CLDN17P56750 224 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 RAB31Q13636 194 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 PEA15Q15121 130 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 FAM131AQ6UXB0 335 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 GDPGP1Q6ZNW5 385 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 TMPPEQ6ZT21 453 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SLC16A9Q7RTY1 509 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 CDC20BQ86Y33 519 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 IZUMO1Q8IYV9 350 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 OTOSQ8NHW6 89 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ASB10Q8WXI3 467 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 C14orf79Q96F83 325 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ATF6BQ99941 703 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ABHD6Q9BV23 337 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SRXN1Q9BYN0 137 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SH2D2AQ9NP31 389 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF701Q9NV72 531 aaPredicted RBP5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ZFP30Q9Y2G7 519 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 TRAV8-7A0A075B6U6 113 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 C5orf63A6NC05 138 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 RER1O15258 196 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF208O43345 1280 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 TRAF3IP2O43734 574 aaPredicted RBP5.37□□□□□ -1.55
SSBP1-213ENST00000496622 RGS11O94810 467 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ABHD16AO95870 558 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 P04436 131 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SERPINA7P05543 415 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 PATE4P0C8F1 98 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ANXA3P12429 323 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SELEP16581 610 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF43P17038 809 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ATF1P18846 271 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ELK1P19419 428 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 GDF1P27539 372 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ETV6P41212 452 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SELENOPP49908 381 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 TNFSF10P50591 281 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SLC25A1P53007 311 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 BTG1P62324 171 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 PPP3R1P63098 170 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 EIF2B1Q14232 305 aaKnown RBP5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SLC17A1Q14916 467 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 FREM1Q5H8C1 2179 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 PLCXD3Q63HM9 321 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 FAM180AQ6UWF9 173 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 GLCCI1Q86VQ1 547 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 COL27A1Q8IZC6 1860 aaPredicted RBP5.37□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF664Q8N3J9 261 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 SAMD12Q8N8I0 201 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 RAB40AQ8WXH6 277 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 FAAP24Q9BTP7 215 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 KCNK15Q9H427 330 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 CMAHPQ9Y471 501 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 A3GALT2U3KPV4 340 aa5.37□□□□□ -1.55
SSBP1-213ENST00000496622 TLN1Q9Y490 2541 aaKnown RBP5.37□□□□□ -1.55
SSBP1-213ENST00000496622 PRR14LQ5THK1 2151 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 A0A0G2JK05 382 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 A0A1B0GUH1 482 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 HOXB5P09067 269 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 HOXA5P20719 270 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 MAGEA5P43359 124 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 KIR2DL3P43628 341 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CDX1P47902 265 aaPredicted RBP5.36□□□□□ -1.55
SSBP1-213ENST00000496622 LGALS7P47929 136 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 PDLIM4P50479 330 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 RAB9AP51151 201 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 BSXQ3C1V8 233 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 WDR38Q5JTN6 314 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF529Q6P280 563 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 SFXN4Q6P4A7 337 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 CNIH2Q6PI25 160 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 NHLRC1Q6VVB1 395 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ASB18Q6ZVZ8 466 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 PIP4P1Q86T03 277 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 UEVLDQ8IX04 471 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF843Q8N446 348 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 JAGN1Q8N5M9 183 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 SLC26A10Q8NG04 563 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 C11orf40Q8WZ69 217 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 TMEM106AQ96A25 262 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 NTNG2Q96CW9 530 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 GFI1Q99684 422 aa5.36□□□□□ -1.55
SSBP1-213ENST00000496622 MAGT1Q9H0U3 335 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms