RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 SEC61A1P61619 476 aaKnown RBP15.27■□□□□ 0.04
TSSC4-210ENST00000496468 GNB2P62879 340 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 SCN1BQ07699 218 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 C2orf76Q3KRA6 126 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 LRRC10Q5BKY1 277 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 CHST4Q8NCG5 386 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 COX4I2Q96KJ9 171 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 URM1Q9BTM9 101 aaKnown RBP15.27■□□□□ 0.04
TSSC4-210ENST00000496468 SSBP3Q9BWW4 388 aaPredicted RBP15.27■□□□□ 0.04
TSSC4-210ENST00000496468 BARHL1Q9BZE3 327 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 SEBOXQ9HB31 216 aaPredicted RBP15.27■□□□□ 0.04
TSSC4-210ENST00000496468 CCDC59Q9P031 241 aaKnown RBP15.27■□□□□ 0.04
TSSC4-210ENST00000496468 CLN8Q9UBY8 286 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 OR5V1Q9UGF6 321 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 ETV7Q9Y603 341 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 ITPR3Q14573 2671 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A10PA6NDY2 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A18PA6NE21 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A16PA6NEW6 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A20PA6NIJ5 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A8PA6NJQ4 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A7PA6NKC0 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A22PA8MWA6 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A12PA8MX19 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A5PA8MXJ8 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A23PA8MXZ1 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 DVL1O14640 695 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 DEGS1O15121 323 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 LDLRAD4O15165 306 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 NDUFB3O43676 98 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 PAHP00439 452 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 WNT2P09544 360 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A15PP0C7V4 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A13PP0C7W8 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A14PP0C7W9 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 FAM90A24PP0C7X0 464 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 RAB6AP20340 208 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 SOX6P35712 828 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 NPY4RP50391 375 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 PDCD1Q15116 288 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 TAF9Q16594 264 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 Q6P435 159 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 CIARTQ8N365 385 aaPredicted RBP15.26■□□□□ 0.03
TSSC4-210ENST00000496468 ZNRF1Q8ND25 227 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 ST8SIA4Q92187 359 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 AP3S1Q92572 193 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 KCTD12Q96CX2 325 aaKnown RBP15.26■□□□□ 0.03
TSSC4-210ENST00000496468 TM2D1Q9BX74 207 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 ABRACLQ9P1F3 81 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 SLC25A10Q9UBX3 287 aaPredicted RBP15.26■□□□□ 0.03
TSSC4-210ENST00000496468 RAB22AQ9UL26 194 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 MAB21L2Q9Y586 359 aa15.26■□□□□ 0.03
TSSC4-210ENST00000496468 A8MXK9 166 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 SLC33A1O00400 549 aaPredicted RBP15.25■□□□□ 0.03
TSSC4-210ENST00000496468 HSPB6O14558 160 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 ZNF737O75373 536 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 PLA2G7Q13093 441 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 TMEM249Q2WGJ8 235 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 PAN3Q58A45 887 aaKnown RBP15.25■□□□□ 0.03
TSSC4-210ENST00000496468 WDR25Q64LD2 544 aaPredicted RBP15.25■□□□□ 0.03
TSSC4-210ENST00000496468 PPP1R35Q8TAP8 253 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 NICN1Q9BSH3 213 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 CHST6Q9GZX3 395 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 FAM234AQ9H0X4 552 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 LPAR5Q9H1C0 372 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 IFT22Q9H7X7 185 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 SPACA1Q9HBV2 294 aa15.25■□□□□ 0.03
TSSC4-210ENST00000496468 CREBBPQ92793 2442 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 TMEM82A0PJX8 343 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 FAM157AC9JC47 383 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 PHF1O43189 567 aaPredicted RBP15.24■□□□□ 0.03
TSSC4-210ENST00000496468 PSPNO60542 156 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 FOXH1O75593 365 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 TK1P04183 234 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 NDUFB7P17568 137 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 EFNB2P52799 333 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 FAM189A2Q15884 450 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 ATAD3CQ5T2N8 411 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 ZNF841Q6ZN19 808 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 OR8H2Q8N162 312 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 DYNC2LI1Q8TCX1 351 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 PTX4Q96A99 478 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 SNX22Q96L94 193 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 PPA2Q9H2U2 334 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 LPAR2Q9HBW0 351 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 ZNF581Q9P0T4 197 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 TEX15Q9BXT5 2789 aa15.24■□□□□ 0.03
TSSC4-210ENST00000496468 ZNF469Q96JG9 3925 aaPredicted RBP15.24■□□□□ 0.03
TSSC4-210ENST00000496468 TRAV24A0A0B4J272 114 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 H3BUI4 141 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 K7N7A8 449 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 PDCD6O75340 191 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 FCN3O75636 299 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 IGHV4-31P0DP07 118 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 ZNF182P17025 639 aaPredicted RBP15.23■□□□□ 0.03
TSSC4-210ENST00000496468 LMO1P25800 156 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 OR3A1P47881 315 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 GZMKP49863 264 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 LCN2P80188 198 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 GRK1Q15835 563 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms