RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	CCL2	P13500	99 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	ARR3	P36575	388 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	MEOX1	P50221	254 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	UCP3	P55916	312 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	SAXO1	Q8IYX7	474 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	BOLL	Q8N9W6	283 aa	Known RBP	13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	ARL11	Q969Q4	196 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	OR2S2	Q9NQN1	319 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	SLC2A9	Q9NRM0	540 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	ZNF503-AS2	A6NEH8	195 aa		13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	OR5AC1	P0C628	307 aa		13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	DAZAP2	Q15038	168 aa	Predicted RBP	13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	TSC22D1	Q15714	1073 aa		13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	MCEMP1	Q8IX19	187 aa		13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	ZDHHC23	Q8IYP9	409 aa		13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	FER1L6-AS2	Q96M78	137 aa		13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	SYT3	Q9BQG1	590 aa		13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	AHCTF1	Q8WYP5	2266 aa		13.21	□□□□□ -0.3
CALD1-222	ENST00000495522	KLRC4-KLRK1	H3BQV0	150 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522		K7EPK0	472 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	NME2P1	O60361	137 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	CST4	P01036	141 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	FAM157C	P0CG43	387 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	BCL3	P20749	454 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	NME2	P22392	152 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	RPL12	P30050	165 aa	Known RBP	13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	HERV-K104	P61576	105 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	CEACAM21	Q3KPI0	293 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	SP6	Q3SY56	376 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	PHLDA2	Q53GA4	152 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	EIF5AL1	Q6IS14	154 aa	Known RBP	13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	DHRS13	Q6UX07	377 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522		Q6ZPA2	131 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	BATF2	Q8N1L9	274 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	FAM71E2	Q8N5Q1	922 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	LRTM2	Q8N967	370 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	HPSE2	Q8WWQ2	592 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	SLAMF9	Q96A28	289 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	LRRC46	Q96FV0	321 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	SS18L1	O75177	396 aa	Predicted RBP	13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	TNFSF15	O95150	251 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	BTF3	P20290	206 aa	Known RBP	13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	GPM6A	P51674	278 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	RAB1A	P62820	205 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	DEFA5	Q01523	94 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	ATRAID	Q6UW56	229 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	MDS2	Q8NDY4	140 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	EXTL1	Q92935	676 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	PRRX2	Q99811	253 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	FGF23	Q9GZV9	251 aa	Predicted RBP	13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	LPAR3	Q9UBY5	353 aa		13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	LSM5	Q9Y4Y9	91 aa	Known RBP	13.2	□□□□□ -0.3
CALD1-222	ENST00000495522	SIGLEC5	O15389	551 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	FGF12	P61328	243 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	PLP2	Q04941	152 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	SPEM2	Q0P670	501 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	C3AR1	Q16581	482 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	HES3	Q5TGS1	186 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	RPL7L1	Q6DKI1	246 aa	Known RBP	13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	OR2A2	Q6IF42	318 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	LIAT1	Q6ZQX7	453 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	CCDC71L	Q8N9Z2	235 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	OR5L1	Q8NGL2	311 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	POM121L2	Q96KW2	1035 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	RSRP1	Q9BUV0	290 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	OPA3	Q9H6K4	179 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	TAF9B	Q9HBM6	251 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	FAM86C1	Q9NVL1	165 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	CRIM1	Q9NZV1	1036 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	FREM1	Q5H8C1	2179 aa		13.19	□□□□□ -0.3
CALD1-222	ENST00000495522	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	ZNHIT1	O43257	154 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	SCGB1D2	O95969	90 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	ACTL6A	O96019	429 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	AADAC	P22760	399 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522		Q6ZS49	121 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	NUFIP2	Q7Z417	695 aa	Known RBP	13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	LGI3	Q8N145	548 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	SAT2	Q96F10	170 aa	Predicted RBP	13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	C18orf12	Q96KH6	178 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	PLEKHA2	Q9HB19	425 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	MMP26	Q9NRE1	261 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	PLSCR2	Q9NRY7	297 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	TMEM218	A2RU14	115 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	ZNF732	B4DXR9	585 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522		H7C1Q1	480 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	LRP3	O75074	770 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	SLC10A1	Q14973	349 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	MKX	Q8IYA7	352 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	OR5T2	Q8NGG2	359 aa		13.18	□□□□□ -0.3
CALD1-222	ENST00000495522	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	GPR179	Q6PRD1	2367 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	TRAPPC2L	H3BP13	241 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	NGF	P01138	241 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	PPY	P01298	95 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	GAPDH	P04406	335 aa	Known RBP	13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	CD46	P15529	392 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	MPV17L	Q2QL34	196 aa		13.17	□□□□□ -0.3
CALD1-222	ENST00000495522	IL34	Q6ZMJ4	242 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms