RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 LIN54Q6MZP7 749 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 LPCAT3Q6P1A2 487 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 FAM180AQ6UWF9 173 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 DHRS11Q6UWP2 260 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 C3P1Q6ZMU1 363 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 Q6ZS49 121 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 BEND4Q6ZU67 534 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 RTL8AQ9BWD3 113 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 FXYD6Q9H0Q3 95 aa9.05□□□□□ -0.96
PRPF4B-209ENST00000494674 LRP5LA4QPB2 252 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 HMSDA8MTL9 139 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 MCRIP1C9JLW8 97 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 MLNRO43193 412 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 TPD52L2O43399 206 aaKnown RBP9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 SFT2D2O95562 160 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 GLI4P10075 376 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 PRKACAP17612 351 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 GLRA1P23415 457 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 VAMP1P23763 118 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 DUSP1P28562 367 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 ZNF81P51508 661 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 ERVK11-1P61568 191 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 C11orf88Q6PI97 169 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 SLC22A25Q6T423 547 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 CLEC18BQ6UXF7 455 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 LINC00596Q86U02 117 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 SCCPDHQ8NBX0 429 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 CASTOR1Q8WTX7 329 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 ELMOD3Q96FG2 381 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 SCGB3A2Q96PL1 93 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 PHB2Q99623 299 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 ZNF2Q9BSG1 426 aaPredicted RBP9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 ADAT1Q9BUB4 502 aaKnown RBP9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 ZNF442Q9H7R0 627 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 NECAP2Q9NVZ3 263 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 ITGB1BP2Q9UKP3 347 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 AMDHD2Q9Y303 409 aa9.04□□□□□ -0.96
PRPF4B-209ENST00000494674 TRAV24A0A0B4J272 114 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 A0A0B4J2A0 478 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 A0A1B0GWJ7 208 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 H0YL77 283 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 ZNF205O95201 554 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 KITLGP21583 273 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 SEC61A1P61619 476 aaKnown RBP9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 SORDQ00796 357 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 ZNF154Q13106 437 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 IKZF1Q13422 519 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 IL13RA2Q14627 380 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 NDUFA5Q16718 116 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 ANKRD55Q3KP44 614 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 ZNF767PQ75MW2 155 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 FAM58AQ8N1B3 248 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 MICU1Q9BPX6 476 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 SLX1AQ9BQ83 275 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 SFXN3Q9BWM7 321 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 PLK3Q9H4B4 646 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 IFT22Q9H7X7 185 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 ZNF286AQ9HBT8 521 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 PRR13Q9NZ81 148 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 SHPKQ9UHJ6 478 aa9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 PURGQ9UJV8 347 aaKnown RBP9.03□□□□□ -0.96
PRPF4B-209ENST00000494674 RFPL4AA6NLU0 287 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 RFPL4AL1F8VTS6 287 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 TSC22D2O75157 780 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 CTSDP07339 412 aaPredicted RBP9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 SELEP16581 610 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 TUBG1P23258 451 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 NFYAP23511 347 aaPredicted RBP9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 SRSF7Q16629 238 aaKnown RBP eCLIP9.02□□□□□ -0.961e-5■■■□□ 19.1
PRPF4B-209ENST00000494674 MSMPQ1L6U9 139 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 Q6P435 159 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 TEX261Q6UWH6 196 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 Q6ZR03 302 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 C5orf24Q7Z6I8 188 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 MARVELD3Q96A59 401 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 S100PBPQ96BU1 408 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 DHRS9Q9BPW9 319 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 NRIP2Q9BQI9 281 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 WDR13Q9H1Z4 485 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 RHOFQ9HBH0 211 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 Q9N2K0 584 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 TUBG2Q9NRH3 451 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 U3KQ87 197 aa9.02□□□□□ -0.96
PRPF4B-209ENST00000494674 PLCE1Q9P212 2302 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 ARPC5O15511 151 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 HOXD4P09016 255 aaPredicted RBP9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 PGA5P0DJD9 388 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 ECI1P42126 302 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 NAAAQ02083 359 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 SLC9A3R2Q15599 337 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 TIMM23BQ5SRD1 257 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 MBNL2Q5VZF2 373 aaKnown RBP9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 KCTD9Q7L273 389 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 DOLPP1Q86YN1 238 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 CISD2Q8N5K1 135 aaKnown RBP9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 SUMF2Q8NBJ7 301 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 ZNF680Q8NEM1 530 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 OR8G5Q8NG78 346 aa9.02□□□□□ -0.97
PRPF4B-209ENST00000494674 LILRB4Q8NHJ6 448 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms