RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 UBE2NLQ5JXB2 153 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 Q5PR19 223 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 SFRP4Q6FHJ7 346 aaPredicted RBP10.4□□□□□ -0.74
SNX17-208ENST00000493711 TGIF2LYQ8IUE0 185 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 ZNF561Q8N587 486 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 FAM89BQ8N5H3 189 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 TMEM104Q8NE00 496 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 DEFB108BQ8NET1 73 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 MCFD2Q8NI22 146 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 FAM46BQ96A09 425 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 S100A16Q96FQ6 103 aaKnown RBP10.4□□□□□ -0.74
SNX17-208ENST00000493711 NEDD4LQ96PU5 975 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 GAL3ST1Q99999 423 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 NUDT16L1Q9BRJ7 211 aaKnown RBP10.4□□□□□ -0.74
SNX17-208ENST00000493711 TMEM246Q9BRR3 403 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 DCUN1D5Q9BTE7 237 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 SLIRPQ9GZT3 109 aaKnown RBP10.4□□□□□ -0.74
SNX17-208ENST00000493711 FAM234AQ9H0X4 552 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 ABCG5Q9H222 651 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 BANF2Q9H503 90 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 DIABLOQ9NR28 239 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 RHBDL2Q9NX52 303 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 DCAF16Q9NXF7 216 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 COMMD3Q9UBI1 195 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 PCDHB10Q9UN67 800 aa10.4□□□□□ -0.74
SNX17-208ENST00000493711 IGKV1D-17A0A075B6S4 117 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 RFPL4AA6NLU0 287 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 VWC2LB2RUY7 222 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 RFPL4AL1F8VTS6 287 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 OR7C1O76099 320 aaPredicted RBP10.39□□□□□ -0.75
SNX17-208ENST00000493711 TPPPO94811 219 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 PAHP00439 452 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 APOA1P02647 267 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 FUT3P21217 361 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 LMO1P25800 156 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 GABRA2P47869 451 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 KCNJ3P48549 501 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 IKZF1Q13422 519 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 RBM39Q14498 530 aaKnown RBP10.39□□□□□ -0.75
SNX17-208ENST00000493711 FAM201AQ5SY85 155 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 AVPI1Q5T686 147 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 ZNF788Q6ZQV5 615 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 SAMD12Q8N8I0 201 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 OR5D13Q8NGL4 314 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 RAB39BQ96DA2 213 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 NEIL1Q96FI4 390 aaPredicted RBP10.39□□□□□ -0.75
SNX17-208ENST00000493711 NXF2Q9GZY0 626 aaKnown RBP10.39□□□□□ -0.75
SNX17-208ENST00000493711 LPAR5Q9H1C0 372 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 ATG5Q9H1Y0 275 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 RABL2AQ9UBK7 228 aaPredicted RBP10.39□□□□□ -0.75
SNX17-208ENST00000493711 OR14J1Q9UGF5 321 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 ZNF222Q9UK12 451 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 RABL2BQ9UNT1 228 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 PEX16Q9Y5Y5 336 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 HIVEP1P15822 2718 aa10.39□□□□□ -0.75
SNX17-208ENST00000493711 IGHV3OR15-7A0A075B7D8 119 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 A0A0B4J203 849 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 FUOMA2VDF0 154 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 TNFRSF13BO14836 293 aaPredicted RBP10.38□□□□□ -0.75
SNX17-208ENST00000493711 GEMIN2O14893 280 aaKnown RBP10.38□□□□□ -0.75
SNX17-208ENST00000493711 SIGLEC5O15389 551 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 ADAM20O43506 726 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 PDCD6O75340 191 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 CA11O75493 328 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 ZNF205O95201 554 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 OR2H2O95918 312 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 GYPAP02724 150 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 ZNF44P15621 663 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 S100A5P33763 92 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 TALDO1P37837 337 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 NPY4RP50391 375 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 TAF9Q16594 264 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 PIGYQ3MUY2 71 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 LRRC10Q5BKY1 277 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 OR10K2Q6IF99 312 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 OR8B3Q8NGG8 313 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 C15orf40Q8WUR7 153 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 SNX22Q96L94 193 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 OR8B2Q96RD0 313 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 BPESC1Q9GZL8 116 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 PATZ1Q9HBE1 687 aaKnown RBP10.38□□□□□ -0.75
SNX17-208ENST00000493711 PTTG2Q9NZH5 202 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 HSF4Q9ULV5 492 aa10.38□□□□□ -0.75
SNX17-208ENST00000493711 DNHD1Q96M86 4753 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 A0A1W2PP11 408 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 POM121CA8CG34 1229 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 CEACAM18A8MTB9 384 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 MCRIP1C9JLW8 97 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 H7C1Q1 480 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 TMPRSS2O15393 492 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 RGS5O15539 181 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 NDUFB3O43676 98 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 RPS2P15880 293 aaKnown RBP10.37□□□□□ -0.75
SNX17-208ENST00000493711 USF1P22415 310 aaPredicted RBP10.37□□□□□ -0.75
SNX17-208ENST00000493711 GABRR1P24046 479 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 BLVRBP30043 206 aaPredicted RBP10.37□□□□□ -0.75
SNX17-208ENST00000493711 EFNB2P52799 333 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 SNU13P55769 128 aaKnown RBP10.37□□□□□ -0.75
SNX17-208ENST00000493711 COL10A1Q03692 680 aa10.37□□□□□ -0.75
SNX17-208ENST00000493711 SCN1BQ07699 218 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms