RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	OR5B12	Q96R08	314 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	FEV	Q99581	238 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	MNT	Q99583	582 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	THTPA	Q9BU02	230 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	YIPF3	Q9GZM5	350 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	EGLN3	Q9H6Z9	239 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	CMC2	Q9NRP2	79 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	DNAJC27	Q9NZQ0	273 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	GTF2A1L	Q9UNN4	478 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	SLC7A11	Q9UPY5	501 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	POLDIP2	Q9Y2S7	368 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	MOB4	Q9Y3A3	225 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	ORC6	Q9Y5N6	252 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	MINOS1-NBL1	R4GNA1	71 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	HSPE1-MOB4	S4R3N1	261 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602		U3KQV3	271 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	RNF213	Q63HN8	5207 aa		4.13	□□□□□ -1.75
SEC13-219	ENST00000492602	FUOM	A2VDF0	154 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ARRDC5	A6NEK1	342 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602		A6NHS1	94 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	AQP12B	A6NM10	295 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	LINC01548	A6NM66	108 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	OR2AT4	A6NND4	320 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	PRODH	O43272	600 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	AKR7A2	O43488	359 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ATP5H	O75947	161 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	SOX14	O95416	240 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	CST4	P01036	141 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	NRAS	P01111	189 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ELANE	P08246	267 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	OR8U9	P0C7N5	309 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	SLC2A1	P11166	492 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	OSM	P13725	252 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	GLRA1	P23415	457 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	HTR1D	P28221	377 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	RIDA	P52758	137 aa	Known RBP	4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF121	P58317	390 aa	Predicted RBP	4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ISL1	P61371	349 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	FAM3A	P98173	230 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	FOXE3	Q13461	319 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	CRMP1	Q14194	572 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	GINS1	Q14691	196 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	SNAI3	Q3KNW1	292 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	KRTAP27-1	Q3LI81	207 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	GTSCR1	Q86UQ5	136 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	SPATA24	Q86W54	205 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	AQP12A	Q8IXF9	295 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ZDHHC23	Q8IYP9	409 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	CCDC54	Q8NEL0	328 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	OR1M1	Q8NGA1	313 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	OR9Q2	Q8NGE9	314 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	OR2T27	Q8NH04	317 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	OTOS	Q8NHW6	89 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	RNF133	Q8WVZ7	376 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	RFK	Q969G6	155 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	SPSB4	Q96A44	273 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	FUZ	Q9BT04	418 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	RSRP1	Q9BUV0	290 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ABHD6	Q9BV23	337 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	PNRC2	Q9NPJ4	139 aa	Known RBP	4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ARL8B	Q9NVJ2	186 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF446	Q9NWS9	450 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	MRPL22	Q9NWU5	206 aa	Known RBP	4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	NLK	Q9UBE8	527 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	DNAJB9	Q9UBS3	223 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	ENPP5	Q9UJA9	477 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	IKZF2	Q9UKS7	526 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	RHBDD3	Q9Y3P4	386 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	COMMD3-BMI1	R4GMX3	469 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602	DSCAML1	Q8TD84	2053 aa		4.12	□□□□□ -1.75
SEC13-219	ENST00000492602		A0A0U1RQV5	110 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	MEX3A	A1L020	520 aa	Known RBP	4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	OR5B21	A6NL26	309 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF850	A8MQ14	1090 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	C17orf98	A8MV24	154 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF732	B4DXR9	585 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF670-ZNF695	F2Z2N8	137 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	NXPH2	O95156	264 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	IGHG2	P01859	326 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	TFAP2A	P05549	437 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	KRT8	P05787	483 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	GYPB	P06028	91 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	PIP	P12273	146 aa	Predicted RBP	4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	FCGR1A	P12314	374 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	OTX1	P32242	354 aa	Predicted RBP	4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	DCTD	P32321	178 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	OPRL1	P41146	370 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	KIR3DL2	P43630	455 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	GPM6A	P51674	278 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	SLURP1	P55000	103 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ACTA2	P62736	377 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	GNB1	P62873	340 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ACTG2	P63267	376 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ACTC1	P68032	377 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	ACTA1	P68133	377 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	PITPNA	Q00169	270 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	PRDX4	Q13162	271 aa		4.11	□□□□□ -1.75
SEC13-219	ENST00000492602	FLOT2	Q14254	428 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms