RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 ELP2Q6IA86 826 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 UNQ9370/PRO34162Q6UXP9 181 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 SATL1Q86VE3 508 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 CMTM4Q8IZR5 234 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 OR8H2Q8N162 312 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 TPRX1Q8N7U7 411 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 ASCC1Q8N9N2 400 aaKnown RBP5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 PXT1Q8NFP0 134 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 OR10K1Q8NGX5 313 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 C17orf50Q8WW18 174 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 MYDGFQ969H8 173 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 DERL3Q96Q80 235 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 OR14A2Q96R54 314 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 JMJD8Q96S16 334 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 CHST6Q9GZX3 395 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 PPIL3Q9H2H8 161 aaKnown RBP5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 METTL8Q9H825 291 aaKnown RBP5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 RHOFQ9HBH0 211 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 TMEM138Q9NPI0 162 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 SCN3BQ9NY72 215 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 ZNF581Q9P0T4 197 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 ERGIC3Q9Y282 383 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 GSTK1Q9Y2Q3 226 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 TENM1Q9UKZ4 2725 aa5.87□□□□□ -1.47
PDLIM1-204ENST00000492511 WNK2Q9Y3S1 2297 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 TRAV24A0A0B4J272 114 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 SIRPB1O00241 398 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 SLC33A1O00400 549 aaPredicted RBP5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 SH2D1BO14796 132 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 NPFFO15130 113 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 CDRT1O95170 752 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 CD2P06729 351 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 FSTP19883 344 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 GABRR1P24046 479 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 BDKRB2P30411 391 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 ZNF93P35789 620 aaPredicted RBP5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 TGFBR2P37173 567 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 VHLP40337 213 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 PTGFRP43088 359 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 MAP2K4P45985 399 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 MTNR1BP49286 362 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 COMPP49747 757 aaPredicted RBP5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 UBE2E1P51965 193 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 BDH1Q02338 343 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 SPHARQ15513 63 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 GRK1Q15835 563 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 LDLRAD2Q5SZI1 272 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 FAM27D1Q5T7N8 215 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 DDI2Q5TDH0 399 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 C12orf54Q6X4T0 127 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 RBMS3Q6XE24 437 aaKnown RBP5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 OR51T1Q8NGJ9 327 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 OR5D13Q8NGL4 314 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 TBC1D15Q8TC07 691 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 TNFAIP8L1Q8WVP5 186 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 COQ2Q96H96 371 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 CNBD2Q96M20 576 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 MND1Q9BWT6 205 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 VCX3BQ9H321 246 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 NEK6Q9HC98 313 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 EXOSC4Q9NPD3 245 aaKnown RBP5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 NOX4Q9NPH5 578 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 RAB26Q9ULW5 256 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 FOXJ3Q9UPW0 622 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 TPRKBQ9Y3C4 175 aa5.86□□□□□ -1.47
PDLIM1-204ENST00000492511 TRRAPQ9Y4A5 3859 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 A0A1W2PP11 408 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 MEIOCA2RUB1 952 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 MGST3O14880 152 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 DEGS1O15121 323 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 MAGEB3O15480 346 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 RGS10O43665 173 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 SC5DO75845 299 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 MMP23AO75900 390 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 IGHV4-59P01825 116 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 MAS1P04201 325 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 ZNF728P0DKX0 622 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 HKR1P10072 659 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 CD37P11049 281 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 PAX6P26367 422 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 ERP29P30040 261 aaKnown RBP5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 SAA4P35542 130 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 IER3P46695 156 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 GLIPR1P48060 266 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 HSPA13P48723 471 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 BMXP51813 675 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 P2RX3P56373 397 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 EDDM3BP56851 147 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 PPP3R1P63098 170 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 GUCA2AQ02747 115 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 MEF2CQ06413 473 aaPredicted RBP5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 SCN1BQ07699 218 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 AESQ08117 197 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 TPBGQ13641 420 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 BLMHQ13867 455 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 EDDM3AQ14507 147 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 MED22Q15528 200 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 PIGYQ3MUY2 71 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 ACSM3Q53FZ2 586 aa5.85□□□□□ -1.47
PDLIM1-204ENST00000492511 RBM48Q5RL73 367 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms