RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CDKN1AP38936 164 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 UCP2P55851 309 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 LSM6P62312 80 aaKnown RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 EGR3Q06889 387 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 MFGE8Q08431 387 aaPredicted RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ACSM1Q08AH1 577 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 CDK5R1Q15078 307 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 HFEQ30201 348 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SLC25A35Q3KQZ1 300 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SLC25A53Q5H9E4 307 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 PRAMEF6Q5VXH4 476 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 STEAP1BQ6NZ63 245 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 CDH26Q8IXH8 852 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 HSD17B11Q8NBQ5 300 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 OR6S1Q8NH40 331 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 OR52N1Q8NH53 320 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 YIPF6Q96EC8 236 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 PERPQ96FX8 193 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 METTL9Q9H1A3 318 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 RNF122Q9H9V4 155 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SAP30LQ9HAJ7 183 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 MRPL22Q9NWU5 206 aaKnown RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 PIGBOS1A0A0B4J2F0 54 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF816-ZNF321PA0A0X1KG74 233 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 NUDT19A8MXV4 375 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 CDIPTO14735 213 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 RGS11O94810 467 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 OR2F2O95006 317 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SCAF4O95104 1147 aaKnown RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 IGHG3P01860 377 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 CECR9P0C854 216 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ANXA7P20073 488 aaKnown RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ACHEP22303 614 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 BLVRBP30043 206 aaPredicted RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 EVX1P49640 407 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ATP5J2P56134 94 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 FABP9Q0Z7S8 132 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 PRDX4Q13162 271 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 OR2F1Q13607 317 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 GGTLC2Q14390 218 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 VAMP3Q15836 100 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 C9orf152Q5JTZ5 239 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 FAM74A1Q5RGS3 127 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SSX7Q7RTT5 188 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 MOGAT3Q86VF5 341 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF808Q8N4W9 903 aaPredicted RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 LINC00469Q8N7U9 141 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ZIC4Q8N9L1 334 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 CCDC71LQ8N9Z2 235 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 LILRB1Q8NHL6 650 aaPredicted RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 APH1BQ8WW43 257 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 RNASE6Q93091 150 aaKnown RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 WFIKKN1Q96NZ8 548 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SLC25A21Q9BQT8 299 aaPredicted RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 TRAF4Q9BUZ4 470 aaPredicted RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 RAB1BQ9H0U4 201 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 PPP1R14DQ9NXH3 145 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 PPP1R3CQ9UQK1 317 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 MRPS18CQ9Y3D5 142 aaKnown RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SHANK1Q9Y566 2161 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SMAD7O15105 426 aaKnown RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 APOA2P02652 100 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 CRHP06850 196 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ELK1P19419 428 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 TNFRSF1AP19438 455 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SRMP19623 302 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 HTR2CP28335 458 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 GRNP28799 593 aaKnown RBP3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF85Q03923 595 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 BAMBIQ13145 260 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 CLINT1Q14677 625 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 PCK2Q16822 640 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 UBE2NLQ5JXB2 153 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 BRICD5Q6PL45 260 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 CCDC190Q86UF4 302 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 BAGE3Q86Y29 109 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 BAGE2Q86Y30 109 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ZNF695Q8IW36 515 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 MFSD4AQ8N468 514 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 UBAC2Q8NBM4 344 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 OR10D4PQ8NGN7 298 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 FGFBP3Q8TAT2 258 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 HAVCR2Q8TDQ0 301 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ABHD5Q8WTS1 349 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 SSC4DQ8WTU2 575 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 BTF3L4Q96K17 158 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 NICN1Q9BSH3 213 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 TMEM59Q9BXS4 323 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 PRDM14Q9GZV8 571 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 TMPRSS5Q9H3S3 457 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ZCCHC4Q9H5U6 513 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 ENY2Q9NPA8 101 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 C1orf123Q9NWV4 160 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 KCNIP1Q9NZI2 227 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 MIOXQ9UGB7 285 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 TRAPPC2LQ9UL33 140 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 LHFPL6Q9Y693 200 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 EML6Q6ZMW3 1958 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 DNAH14Q0VDD8 3507 aa3.89□□□□□ -1.79
TRA2B-215ENST00000492417 IGLV1-36A0A0B4J1U3 117 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms