RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 CCL24O00175 119 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 SIRPB1O00241 398 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 CALCBP10092 127 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 BCL3P20749 454 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 CCL1P22362 96 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 ECI1P42126 302 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 FUT6P51993 359 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 GP2P55259 537 aaKnown RBP11.01□□□□□ -0.65
VARS-227ENST00000489979 CXCR4P61073 352 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 GK3PQ14409 553 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 RBM39Q14498 530 aaKnown RBP11.01□□□□□ -0.65
VARS-227ENST00000489979 KPNB1Q14974 876 aaKnown RBP11.01□□□□□ -0.65
VARS-227ENST00000489979 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 DHFR2Q86XF0 187 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 FAM58AQ8N1B3 248 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 CNN2Q99439 309 aaKnown RBP11.01□□□□□ -0.65
VARS-227ENST00000489979 PLEKHA1Q9HB21 404 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 MED4Q9NPJ6 270 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 NDE1Q9NXR1 346 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 GAR1Q9NY12 217 aaKnown RBP11.01□□□□□ -0.65
VARS-227ENST00000489979 TVP23BQ9NYZ1 205 aa11.01□□□□□ -0.65
VARS-227ENST00000489979 FAM90A18PA6NE21 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A16PA6NEW6 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A20PA6NIJ5 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A9PA6NNJ1 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A12PA8MX19 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A5PA8MXJ8 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 OOSP1A8MZH6 123 aa11□□□□□ -0.65
VARS-227ENST00000489979 ENTPD6O75354 484 aa11□□□□□ -0.65
VARS-227ENST00000489979 CST1P01037 141 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A15PP0C7V4 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A13PP0C7W8 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A14PP0C7W9 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM90A24PP0C7X0 464 aa11□□□□□ -0.65
VARS-227ENST00000489979 PRKACAP17612 351 aa11□□□□□ -0.65
VARS-227ENST00000489979 PRRX1P54821 245 aa11□□□□□ -0.65
VARS-227ENST00000489979 ACTR3P61158 418 aa11□□□□□ -0.65
VARS-227ENST00000489979 SLC35B1P78383 322 aa11□□□□□ -0.65
VARS-227ENST00000489979 ZNF146Q15072 292 aa11□□□□□ -0.65
VARS-227ENST00000489979 UTF1Q5T230 341 aa11□□□□□ -0.65
VARS-227ENST00000489979 C9orf66Q5T8R8 295 aa11□□□□□ -0.65
VARS-227ENST00000489979 THNSL2Q86YJ6 484 aa11□□□□□ -0.65
VARS-227ENST00000489979 Q8IYB0 196 aa11□□□□□ -0.65
VARS-227ENST00000489979 COMMD1Q8N668 190 aa11□□□□□ -0.65
VARS-227ENST00000489979 C5orf56Q8N8D9 126 aa11□□□□□ -0.65
VARS-227ENST00000489979 CORO2AQ92828 525 aa11□□□□□ -0.65
VARS-227ENST00000489979 BORCS8Q96FH0 119 aa11□□□□□ -0.65
VARS-227ENST00000489979 TEX12Q9BXU0 123 aa11□□□□□ -0.65
VARS-227ENST00000489979 FAM107BQ9H098 131 aa11□□□□□ -0.65
VARS-227ENST00000489979 ZNF556Q9HAH1 456 aa11□□□□□ -0.65
VARS-227ENST00000489979 TAS2R3Q9NYW6 316 aa11□□□□□ -0.65
VARS-227ENST00000489979 MRM2Q9UI43 246 aaKnown RBP11□□□□□ -0.65
VARS-227ENST00000489979 TRBV2A0A0J9YWF9 115 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 SYT7O43581 403 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 GATBO75879 557 aaKnown RBP10.99□□□□□ -0.65
VARS-227ENST00000489979 RPP14O95059 124 aaKnown RBP10.99□□□□□ -0.65
VARS-227ENST00000489979 RAP2AP10114 183 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 CHATP28329 748 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 GLIPR1P48060 266 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 POU3F4P49335 361 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 MS4A2Q01362 244 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 AESQ08117 197 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 DEFB136Q30KP8 78 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 SLC35F2Q8IXU6 374 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 HS3ST5Q8IZT8 346 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 OR4D6Q8NGJ1 314 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 OR5M8Q8NGP6 311 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 OR56B4Q8NH76 319 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 RPEQ96AT9 228 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 CHST5Q9GZS9 411 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 SLC25A19Q9HC21 320 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 STARD9Q9P2P6 4700 aa10.99□□□□□ -0.65
VARS-227ENST00000489979 A0A087X0M5 115 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 A0A1B0GX30 115 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 FUOMA2VDF0 154 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 SNX3O60493 162 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 OR2H2O95918 312 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 TMEM11P17152 192 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 PTGFRP43088 359 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 CDC42P60953 191 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 HES1Q14469 280 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 HNF4GQ14541 408 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 SPIN3Q5JUX0 258 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 BCDIN3DQ7Z5W3 292 aaKnown RBP10.98□□□□□ -0.65
VARS-227ENST00000489979 SLC35E3Q7Z769 313 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 STPG2Q8N412 459 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 DRAM1Q8N682 238 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 Q8NFD4 153 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 TOMM40LQ969M1 308 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 DCLRE1BQ9H816 532 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 EXOSC4Q9NPD3 245 aaKnown RBP10.98□□□□□ -0.65
VARS-227ENST00000489979 PCDHB16Q9NRJ7 776 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 ING3Q9NXR8 418 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 SCOCQ9UIL1 159 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 GSTK1Q9Y2Q3 226 aa10.98□□□□□ -0.65
VARS-227ENST00000489979 SORL1Q92673 2214 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 ODAMA1E959 279 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 LINC01548A6NM66 108 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
VARS-227ENST00000489979 ZNF670-ZNF695F2Z2N8 137 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms