RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 PRRX2Q99811 253 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 DNAJB11Q9UBS4 358 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 MED12LQ86YW9 2145 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 DMXL2Q8TDJ6 3036 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 A0A1W2PR80 420 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 MEX3AA1L020 520 aaKnown RBP10.93□□□□□ -0.66
CLIC4-202ENST00000488683 C5orf49A4QMS7 147 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 DNPH1O43598 174 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 DEDDO75618 318 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 PDZK1IP1Q13113 114 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 CNN3Q15417 329 aaKnown RBP10.93□□□□□ -0.66
CLIC4-202ENST00000488683 IZUMO4Q1ZYL8 232 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 PEAR1Q5VY43 1037 aaPredicted RBP10.93□□□□□ -0.66
CLIC4-202ENST00000488683 ASCL4Q6XD76 172 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 OR2V1Q8NHB1 315 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 ABHD14AQ9BUJ0 271 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 MMP26Q9NRE1 261 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 PURGQ9UJV8 347 aaKnown RBP10.93□□□□□ -0.66
CLIC4-202ENST00000488683 HSF4Q9ULV5 492 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 SCTP09683 121 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 PET100P0DJ07 73 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 HAAOP46952 286 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 ARF1P84077 181 aaKnown RBP10.93□□□□□ -0.66
CLIC4-202ENST00000488683 PJVKQ0ZLH3 352 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 CLINT1Q14677 625 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 SPIN3Q5JUX0 258 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 SPATA46Q5T0L3 261 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 RTL6Q6ICC9 239 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 UBALD2Q8IYN6 164 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 SVBPQ8N300 66 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 C17orf78Q8N4C9 275 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 CCDC54Q8NEL0 328 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 OR56B2PQ8NGI1 322 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 GLYATL2Q8WU03 294 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 KCNE4Q8WWG9 221 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 NRIP2Q9BQI9 281 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 ESRP2Q9H6T0 727 aaKnown RBP10.93□□□□□ -0.66
CLIC4-202ENST00000488683 FOXJ2Q9P0K8 574 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 TUBD1Q9UJT1 453 aa10.93□□□□□ -0.66
CLIC4-202ENST00000488683 RNASEK-C17orf49H0YIS7 233 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 PVALBP20472 110 aaPredicted RBP10.92□□□□□ -0.66
CLIC4-202ENST00000488683 MAGEA5P43359 124 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 TMEM187Q14656 261 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 ATP1A1-AS1Q5TC04 95 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 DHRS11Q6UWP2 260 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 LHFPL2Q6ZUX7 228 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 PSMF1Q92530 271 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 ISOC2Q96AB3 205 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 SMIM8Q96KF7 97 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 C12orf49Q9H741 205 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 NECAP2Q9NVZ3 263 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 LRFN1Q9P244 771 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 LOXL2Q9Y4K0 774 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 TIMM10BQ9Y5J6 103 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 ARHGAP21Q5T5U3 1957 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 A0A1W2PNU3 283 aaPredicted RBP10.92□□□□□ -0.66
CLIC4-202ENST00000488683 LAMTOR5O43504 91 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 EIF3GO75821 320 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLIC4-202ENST00000488683 CER1O95813 267 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 MMP7P09237 267 aaPredicted RBP10.92□□□□□ -0.66
CLIC4-202ENST00000488683 SELEP16581 610 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 PRKACAP17612 351 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 KCNJ3P48549 501 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 DUSP3P51452 185 aaPredicted RBP10.92□□□□□ -0.66
CLIC4-202ENST00000488683 HFEQ30201 348 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 C10orf91Q5T1B1 145 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 TMEM268Q5VZI3 342 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 SLC35G3Q8N808 338 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 EDARQ9UNE0 448 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 MEMO1Q9Y316 297 aa10.92□□□□□ -0.66
CLIC4-202ENST00000488683 EP300Q09472 2414 aaPredicted RBP10.91□□□□□ -0.66
CLIC4-202ENST00000488683 ARGFXA6NJG6 315 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 HSD17B6O14756 317 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 ITGA3P26006 1051 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 F2RL1P55085 397 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 GFRA1P56159 465 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 FOXO1Q12778 655 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 OR8B8Q15620 311 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 NAA60Q9H7X0 242 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 MLXQ9UH92 298 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 NOSIPQ9Y314 301 aaKnown RBP10.91□□□□□ -0.66
CLIC4-202ENST00000488683 CACNA1DQ01668 2161 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 ATMQ13315 3056 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 IGKV1D-13A0A0B4J2D9 117 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 FAM24AA6NFZ4 105 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 HS3ST1O14792 307 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 SYNGR1O43759 233 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 IFNA21P01568 189 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 IGKV1-13P0DP09 117 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 DTYMKP23919 212 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 ECI1P42126 302 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 CYB561P49447 251 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 MIDNQ504T8 468 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 PRR18Q8N4B5 295 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 RXFP4Q8TDU9 374 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 NEK7Q8TDX7 302 aa10.91□□□□□ -0.66
CLIC4-202ENST00000488683 ZNF552Q9H707 407 aaPredicted RBP10.91□□□□□ -0.66
CLIC4-202ENST00000488683 RCC2Q9P258 522 aaKnown RBP10.91□□□□□ -0.66
CLIC4-202ENST00000488683 NKX2-6A6NCS4 301 aa10.9□□□□□ -0.66
CLIC4-202ENST00000488683 CBR1P16152 277 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms