RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 GSK3BP49841 420 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ETV1P50549 477 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF133P52736 654 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 MFGE8Q08431 387 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 CD300CQ08708 224 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 RIPK1Q13546 671 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 GNA13Q14344 377 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ABCA11PQ4W5N1 156 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 GPAT3Q53EU6 434 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 C10orf128Q5T292 105 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 OR2T2Q6IF00 324 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 SLC25A24Q6NUK1 477 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 CEMP1Q6PRD7 247 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 FBXW12Q6X9E4 464 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF836Q6ZNA1 936 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 SLC36A1Q7Z2H8 476 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ZNF429Q86V71 674 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 NUDCD3Q8IVD9 361 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 C10orf111Q8N326 155 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 FAM216BQ8N7L0 139 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 CLDN22Q8N7P3 220 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 MCHR2Q969V1 340 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 TEX37Q96LM6 180 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 CCDC115Q96NT0 180 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ABHD1Q96SE0 405 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 SEPHS2Q99611 448 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 DPY30Q9C005 99 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 SIAEQ9HAT2 523 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 GNB4Q9HAV0 340 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 C12orf10Q9HB07 376 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ISYNA1Q9NPH2 558 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 RRAGDQ9NQL2 400 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 UFSP2Q9NUQ7 469 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 C1orf109Q9NX04 203 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 MRPL39Q9NYK5 338 aaKnown RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 BAIAP2L1Q9UHR4 511 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 GUCA1BQ9UMX6 200 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 STARD10Q9Y365 291 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 CHTOPQ9Y3Y2 248 aaKnown RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 UGT2A1Q9Y4X1 527 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 IGHV3OR15-7A0A075B7D8 119 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 EXOC1LA0A1B0GW35 172 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 ACOD1A6NK06 481 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 A8MU10 97 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 SLC28A1O00337 649 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 PLPP3O14495 311 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 NDUFB3O43676 98 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 IGHG1P01857 330 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 BGLAPP02818 100 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 PGA5P0DJD9 388 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 COX5BP10606 129 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 MAGEA12P43365 314 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 SERPINB8P50452 374 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 GBX2P52951 348 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 RPL38P63173 70 aaKnown RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 ELF3P78545 371 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 ECH1Q13011 328 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 KIR2DS1Q14954 304 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 SNAPC1Q16533 368 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 LRRC10Q5BKY1 277 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 LDLRAD2Q5SZI1 272 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 FAM27BQ5VT28 67 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 HHATQ5VTY9 493 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 TNFAIP8L2Q6P589 184 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 ZYG11AQ6WRX3 759 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 SLC35D2Q76EJ3 337 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 SGPP2Q8IWX5 399 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 CLEC4FQ8N1N0 589 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 ABHD12Q8N2K0 398 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 COMMD1Q8N668 190 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 NATD1Q8N6N6 113 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 BHLHE23Q8NDY6 225 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 NOXO1Q8NFA2 376 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 SUN5Q8TC36 379 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 AENQ8WTP8 325 aaKnown RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 PYROXD1Q8WU10 500 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 ACOT11Q8WXI4 607 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 H1FXQ92522 213 aaKnown RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 RASD2Q96D21 266 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 MALSU1Q96EH3 234 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 DUS3LQ96G46 650 aaKnown RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 AKR1E2Q96JD6 320 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 TRNT1Q96Q11 434 aaKnown RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 CCL13Q99616 98 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 MRPL57Q9BQC6 102 aaKnown RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 MRPL13Q9BYD1 178 aaKnown RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 DPH5Q9H2P9 285 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 DCLRE1BQ9H816 532 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 MEAF6Q9HAF1 191 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 TMEM100Q9NV29 134 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 KLK5Q9Y337 293 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 TBL2Q9Y4P3 447 aaKnown RBP3.39□□□□□ -1.87
BRCA1-217ENST00000487825 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
BRCA1-217ENST00000487825 DNAH5Q8TE73 4624 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 A0A087WUV0 522 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-217ENST00000487825 ODF3BA8MYP8 253 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 CENPBD1B2RD01 187 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 LRRN3E7EW58 273 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 C11orf98E9PRG8 122 aa3.38□□□□□ -1.87
BRCA1-217ENST00000487825 G3V2L1 256 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms