RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ZNF229Q9UJW7 825 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 TBC1D24Q9ULP9 559 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 OR6C6A6NF89 314 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 BOLA2-SMG1P6H3BVE0 249 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 DOK2O60496 412 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 CD14P08571 375 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 CLUP10909 449 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 AMY2BP19961 511 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 DYNLT3P51808 116 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 RPS7P62081 194 aaKnown RBP9.26□□□□□ -0.93
TRIM56-204ENST00000487252 RPL23AP62750 156 aaKnown RBP9.26□□□□□ -0.93
TRIM56-204ENST00000487252 MXD1Q05195 221 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 PLA1AQ53H76 456 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 KHDC1LQ5JSQ8 128 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 WDR38Q5JTN6 314 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 FAM122BQ7Z309 247 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 TPRA1Q86W33 373 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 OR5L1Q8NGL2 311 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 MOSPD2Q8NHP6 518 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 ACOT12Q8WYK0 555 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 SLC7A6Q92536 515 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 PGLYRP3Q96LB9 341 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 CNN2Q99439 309 aaKnown RBP9.26□□□□□ -0.93
TRIM56-204ENST00000487252 KRTAP4-5Q9BYR2 181 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 PPP1R3EQ9H7J1 279 aa9.26□□□□□ -0.93
TRIM56-204ENST00000487252 IGHV3OR15-7A0A075B7D8 119 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 OR6C68A6NDL8 312 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.25□□□□□ -0.93
TRIM56-204ENST00000487252 RGS5O15539 181 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 SGCEO43556 437 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 GLCEO94923 617 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 HLA-DQB1P01920 261 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 MRPL3P09001 348 aaKnown RBP9.25□□□□□ -0.93
TRIM56-204ENST00000487252 MUC1P15941 1255 aaPredicted RBP9.25□□□□□ -0.93
TRIM56-204ENST00000487252 SPI1P17947 270 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 MSR1P21757 451 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 DAP3P51398 398 aaKnown RBP9.25□□□□□ -0.93
TRIM56-204ENST00000487252 OR12D2P58182 307 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 ACTA2P62736 377 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 ACTG2P63267 376 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 ASAH1Q13510 395 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 ZNF684Q5T5D7 378 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 LINC01590Q5TEZ4 76 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 MZT2AQ6P582 158 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 C18orf65Q6ZTR6 163 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 C8orf86Q6ZUL3 223 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 SSX6Q7RTT6 188 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 SLC36A1Q7Z2H8 476 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 SLC35F2Q8IXU6 374 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 C11orf42Q8N5U0 333 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 MS4A15Q8N5U1 240 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 ZNRF4Q8WWF5 429 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 APOBEC3DQ96AK3 386 aaPredicted RBP9.25□□□□□ -0.93
TRIM56-204ENST00000487252 MRPL48Q96GC5 212 aaKnown RBP9.25□□□□□ -0.93
TRIM56-204ENST00000487252 C4orf36Q96KX1 117 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 TBX5Q99593 518 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 NDEL1Q9GZM8 345 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 ZCCHC4Q9H5U6 513 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 ADAM18Q9Y3Q7 739 aa9.25□□□□□ -0.93
TRIM56-204ENST00000487252 TRAV1-2A0A0B4J238 106 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 A0A1W2PRG6 482 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 FABP12A6NFH5 140 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 NPIPB13A6NJU9 1138 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 NPIPB4C9JG80 1138 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 J3QLW9 94 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 NDUFB3O43676 98 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 APOA1P02647 267 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 GYPBP06028 91 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 NR2C1P13056 603 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 IL7P13232 177 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 ZNF19P17023 458 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 AQP2P41181 271 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 CDKN2AP42771 156 aaKnown RBP9.24□□□□□ -0.93
TRIM56-204ENST00000487252 ERVFRD-1P60508 538 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 RPL18Q07020 188 aaKnown RBP9.24□□□□□ -0.93
TRIM56-204ENST00000487252 SCRN3Q0VDG4 424 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 CDK5R1Q15078 307 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 BAK1Q16611 211 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 CCDC58Q4VC31 144 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 ATPAF1Q5TC12 328 aaPredicted RBP9.24□□□□□ -0.93
TRIM56-204ENST00000487252 GPR139Q6DWJ6 353 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 ZNF826PQ6ZT77 177 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 OR2W3Q7Z3T1 314 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 LHFPL4Q7Z7J7 247 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 NR2C2APQ86WQ0 139 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 PHYHIPQ92561 330 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 PELI1Q96FA3 418 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 DIRAS2Q96HU8 199 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 LYZL4Q96KX0 146 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 NMNAT3Q96T66 252 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 C14orf119Q9NWQ9 140 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 C1orf123Q9NWV4 160 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 ATPIF1Q9UII2 106 aa9.24□□□□□ -0.93
TRIM56-204ENST00000487252 PKHD1P08F94 4074 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 IGLV1-36A0A0B4J1U3 117 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 TEX13CA0A0J9YWL9 993 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 SERPINA3P01011 423 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 DBHP09172 617 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 SELLP14151 372 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 SDHAP31040 664 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms