RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 PPP1R35Q8TAP8 253 aa8.41□□□□□ -1.06
NEK4-204ENST00000487068 SGCDQ92629 289 aa8.41□□□□□ -1.06
NEK4-204ENST00000487068 UFD1Q92890 307 aa8.41□□□□□ -1.06
NEK4-204ENST00000487068 ZNF184Q99676 751 aaPredicted RBP8.41□□□□□ -1.06
NEK4-204ENST00000487068 FAM234AQ9H0X4 552 aa8.41□□□□□ -1.06
NEK4-204ENST00000487068 PPA2Q9H2U2 334 aa8.41□□□□□ -1.06
NEK4-204ENST00000487068 METTL8Q9H825 291 aaKnown RBP8.41□□□□□ -1.06
NEK4-204ENST00000487068 HMG20AQ9NP66 347 aa8.41□□□□□ -1.06
NEK4-204ENST00000487068 TNFRSF19Q9NS68 423 aa8.41□□□□□ -1.06
NEK4-204ENST00000487068 IGKV1-12A0A0C4DH73 117 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 TRBV5-5A0A0J9YX44 114 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 CENPVL3A0A0U1RRI6 287 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 M0R1W7 72 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 WIPF1O43516 503 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 KDM4BO94953 1096 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 ALX3O95076 343 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 HTR3BO95264 441 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 PAHP00439 452 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 IGKV1D-12P01611 117 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 MAS1P04201 325 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 FSTP19883 344 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 SERPINA2P20848 420 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 MTNR1BP49286 362 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 ZP1P60852 638 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 BDH1Q02338 343 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 RBM48Q5RL73 367 aaKnown RBP8.4□□□□□ -1.06
NEK4-204ENST00000487068 NCR3LG1Q68D85 454 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 ZNF782Q6ZMW2 699 aaPredicted RBP8.4□□□□□ -1.06
NEK4-204ENST00000487068 USP43Q70EL4 1123 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 SAXO1Q8IYX7 474 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 TPRX1Q8N7U7 411 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.4□□□□□ -1.06
NEK4-204ENST00000487068 ZNF485Q8NCK3 441 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 OR5D13Q8NGL4 314 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 OR10K1Q8NGX5 313 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 SNX22Q96L94 193 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 OR5M11Q96RB7 305 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 CDCA4Q9BXL8 241 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 METTL9Q9H1A3 318 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 ING4Q9UNL4 249 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 FAM96BQ9Y3D0 163 aa8.4□□□□□ -1.06
NEK4-204ENST00000487068 ANK2Q01484 3957 aa8.4□□□□□ -1.07
NEK4-204ENST00000487068 TRAV8-7A0A075B6U6 113 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 MAGEA13PA6NCF6 341 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 K7N7A8 449 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 CDRT1O95170 752 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 OR2H2O95918 312 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 CCL3L1P16619 93 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 COX7A1P24310 79 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 CRHBPP24387 322 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 TGFBR2P37173 567 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 BMXP51813 675 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 BPIFB3P59826 476 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 ZNF273Q14593 569 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 ATXN7L3Q14CW9 347 aaPredicted RBP8.39□□□□□ -1.07
NEK4-204ENST00000487068 ZNF146Q15072 292 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 DEFB112Q30KQ8 113 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 LIPKQ5VXJ0 399 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 ASPHD2Q6ICH7 369 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 TBC1D15Q8TC07 691 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 SLC25A28Q96A46 364 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 ZNF48Q96MX3 618 aaPredicted RBP8.39□□□□□ -1.07
NEK4-204ENST00000487068 ZNF714Q96N38 554 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 DERL3Q96Q80 235 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 RHOFQ9HBH0 211 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 TCF7L1Q9HCS4 588 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 NOX4Q9NPH5 578 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 ESM1Q9NQ30 184 aa8.39□□□□□ -1.07
NEK4-204ENST00000487068 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
NEK4-204ENST00000487068 SOX21Q9Y651 276 aaPredicted RBP8.39□□□□□ -1.07
NEK4-204ENST00000487068 A0A0U1RQK1 487 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 hADV38S2A0JD32 116 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 TMEM82A0PJX8 343 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 FUOMA2VDF0 154 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 BTBD17A6NE02 478 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 RNASEK-C17orf49H0YIS7 233 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 MGST3O14880 152 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 DEGS1O15121 323 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 NPFFO15130 113 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 HOXA3O43365 443 aaPredicted RBP8.38□□□□□ -1.07
NEK4-204ENST00000487068 PSPNO60542 156 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 ZNF737O75373 536 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 OR7C1O76099 320 aaPredicted RBP8.38□□□□□ -1.07
NEK4-204ENST00000487068 ALDOBP05062 364 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 SAA4P35542 130 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 PTGFRP43088 359 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 MAP2K4P45985 399 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 ERVFRD-1P60508 538 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 RPS11P62280 158 aaKnown RBP eCLIP8.38□□□□□ -1.07
NEK4-204ENST00000487068 UBA52P62987 128 aaKnown RBP8.38□□□□□ -1.07
NEK4-204ENST00000487068 DOC2BQ14184 412 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 PIGYQ3MUY2 71 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 SLC22A6Q4U2R8 563 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 ACSM3Q53FZ2 586 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 PAN3Q58A45 887 aaKnown RBP8.38□□□□□ -1.07
NEK4-204ENST00000487068 RNLSQ5VYX0 342 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 TMEM200BQ69YZ2 307 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 AWAT2Q6E213 333 aa8.38□□□□□ -1.07
NEK4-204ENST00000487068 ZNF529Q6P280 563 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms