RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RANBP1P43487 201 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 GABRA2P47869 451 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 CAPZA1P52907 286 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 RBM11P57052 281 aaKnown RBP10.66□□□□□ -0.7
HDAC6-229ENST00000486665 SCN1BQ07699 218 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 TAF9Q16594 264 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 MICBQ29980 383 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 ZNF404Q494X3 552 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 NHLRC3Q5JS37 347 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 DUX4L9Q6RFH8 374 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-229ENST00000486665 PEG10Q86TG7 708 aaKnown RBP10.66□□□□□ -0.7
HDAC6-229ENST00000486665 RTN4RL2Q86UN3 420 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 MAPK1IP1LQ8NDC0 245 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 ACOT12Q8WYK0 555 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 SLC25A38Q96DW6 304 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 MRPS24Q96EL2 167 aaKnown RBP10.66□□□□□ -0.7
HDAC6-229ENST00000486665 TIMD4Q96H15 378 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 Q96M66 194 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 CCL13Q99616 98 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 NICN1Q9BSH3 213 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 TM2D1Q9BX74 207 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 TMEM59Q9BXS4 323 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 BPESC1Q9GZL8 116 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 DUX4Q9UBX2 424 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 ETV7Q9Y603 341 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 A0A075B6Q4 140 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 ISPDA4D126 451 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 DEGS1O15121 323 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 SOCS1O15524 211 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 HPGDSO60760 199 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 HAND1O96004 215 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 CSF3P09919 207 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 RAB6AP20340 208 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 GABRR1P24046 479 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 MDH2P40926 338 aaKnown RBP10.65□□□□□ -0.7
HDAC6-229ENST00000486665 NR4A2P43354 598 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 SCAND1P57086 179 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 DSCR9P59020 149 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 DYNC1I2Q13409 638 aaKnown RBP10.65□□□□□ -0.7
HDAC6-229ENST00000486665 IL13RA2Q14627 380 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 MOGAT2Q3SYC2 334 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 SPIN3Q5JUX0 258 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 ATPAF1Q5TC12 328 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-229ENST00000486665 SIGIRRQ6IA17 410 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 MZT2AQ6P582 158 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 ZNF788Q6ZQV5 615 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 CMTM4Q8IZR5 234 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 FAM89BQ8N5H3 189 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 SAMD12Q8N8I0 201 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 DTX3Q8N9I9 347 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 MCFD2Q8NI22 146 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 AP3S1Q92572 193 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 PTX4Q96A99 478 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 GAFA1Q96PS6 74 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 PIMREGQ9BSJ6 248 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 MRI1Q9BV20 369 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 MIXL1Q9H2W2 232 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 NARFLQ9H6Q4 476 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 RHBDL2Q9NX52 303 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 MAB21L2Q9Y586 359 aa10.65□□□□□ -0.7
HDAC6-229ENST00000486665 TRAV24A0A0B4J272 114 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 TMEM82A0PJX8 343 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 CEACAM18A8MTB9 384 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 FOXI3A8MTJ6 420 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-229ENST00000486665 NDUFS8O00217 210 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 SIRPB1O00241 398 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 SH2D1BO14796 132 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 FCN3O75636 299 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 OR2H2O95918 312 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 EIF4EP06730 217 aaKnown RBP10.64□□□□□ -0.71
HDAC6-229ENST00000486665 SELLP14151 372 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 VEGFCP49767 419 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 TMEM50BP56557 158 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 COL10A1Q03692 680 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 IKZF1Q13422 519 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 TMEM155Q4W5P6 130 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 FIP1L1Q6UN15 594 aaKnown RBP10.64□□□□□ -0.71
HDAC6-229ENST00000486665 FGFRL1Q8N441 504 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 FAM216BQ8N7L0 139 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 SDSLQ96GA7 329 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 URM1Q9BTM9 101 aaKnown RBP10.64□□□□□ -0.71
HDAC6-229ENST00000486665 ATG5Q9H1Y0 275 aa10.64□□□□□ -0.71
HDAC6-229ENST00000486665 SEBOXQ9HB31 216 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-229ENST00000486665 IGHV4-61A0A0C4DH41 118 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 RAB27BO00194 218 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 SLC33A1O00400 549 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-229ENST00000486665 ADAM20O43506 726 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 PSPNO60542 156 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 OR7C1O76099 320 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-229ENST00000486665 CHRM2P08172 466 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 WNT2P09544 360 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 ZNF44P15621 663 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 ELK1P19419 428 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 CPT2P23786 658 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 LMO1P25800 156 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 PITPNBP48739 271 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 KCNJ8Q15842 424 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 MPV17LQ2QL34 196 aa10.63□□□□□ -0.71
HDAC6-229ENST00000486665 UBE2NLQ5JXB2 153 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms