RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 KIF13BQ9NQT8 1826 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 MYO5BQ9ULV0 1848 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 DHX57Q6P158 1386 aaKnown RBP3.28□□□□□ -1.88
VPS41-212ENST00000482217 PHLPP1O60346 1717 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 PTPRJQ12913 1337 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 ZNF726A6NNF4 738 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 B4DXG7 233 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 SLC17A3O00476 420 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 SLC22A1O15245 554 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 ATP6V0E1O15342 81 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 GCM2O75603 506 aaPredicted RBP3.28□□□□□ -1.88
VPS41-212ENST00000482217 MYL12AP19105 171 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 PAX6P26367 422 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 CD34P28906 385 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 KLF3P57682 345 aaPredicted RBP3.28□□□□□ -1.88
VPS41-212ENST00000482217 CACNG7P62955 275 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 HIST1H3AP68431 136 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 H3F3AP84243 136 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 ZNF92Q03936 586 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 EMX2Q04743 252 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 MXD1Q05195 221 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 BAMBIQ13145 260 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 NEDD8Q15843 81 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 RNASE10Q5GAN6 216 aaKnown RBP3.28□□□□□ -1.88
VPS41-212ENST00000482217 TNFAIP8L3Q5GJ75 292 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 ZNF684Q5T5D7 378 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 TEX36Q5VZQ5 186 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 RUSC1-AS1Q66K80 236 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 APOOLQ6UXV4 268 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 HIST2H3AQ71DI3 136 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 NAA40Q86UY6 237 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 LRRC28Q86X40 367 aaPredicted RBP3.28□□□□□ -1.88
VPS41-212ENST00000482217 C1orf158Q8N1D5 194 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 UBAC2Q8NBM4 344 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 AQP11Q8NBQ7 271 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 ZNF485Q8NCK3 441 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 ZNF439Q8NDP4 499 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 OR4D11Q8NGI4 311 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 OR10G4Q8NGN3 311 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 OR10G7Q8NGN6 311 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 OR13A1Q8NGR1 328 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 OR10R2Q8NGX6 335 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 OR6F1Q8NGZ6 308 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 OR4C3Q8NH37 302 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 OR51Q1Q8NH59 317 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 RFESDQ8TAC1 157 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 BLNKQ8WV28 456 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 PCNPQ8WW12 178 aaKnown RBP3.28□□□□□ -1.88
VPS41-212ENST00000482217 IL22RA2Q969J5 263 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 TMEM203Q969S6 136 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 REEP6Q96HR9 211 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 GMPPAQ96IJ6 420 aaPredicted RBP3.28□□□□□ -1.88
VPS41-212ENST00000482217 SEC22AQ96IW7 307 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 FAM19A4Q96LR4 140 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 CCDC115Q96NT0 180 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 HMG20AQ9NP66 347 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 TMEM100Q9NV29 134 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 EHFQ9NZC4 300 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 COMMD9Q9P000 198 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 POLR1DQ9Y2S0 133 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 PRSS21Q9Y6M0 314 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 RB1CC1Q8TDY2 1594 aa3.28□□□□□ -1.88
VPS41-212ENST00000482217 FGD6Q6ZV73 1430 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 CAMTA1Q9Y6Y1 1673 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 MYH11P35749 1972 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 ZNF106Q9H2Y7 1883 aaKnown RBP3.27□□□□□ -1.89
VPS41-212ENST00000482217 MEIKINA0A087WXM9 373 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 IGLV1-36A0A0B4J1U3 117 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 IGKV1D-13A0A0B4J2D9 117 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 TRBV5-4A0A0C4DH59 114 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 RBMY1BA6NDE4 496 aaKnown RBP3.27□□□□□ -1.89
VPS41-212ENST00000482217 RBMY1EA6NEQ0 496 aaKnown RBP3.27□□□□□ -1.89
VPS41-212ENST00000482217 RBFOX3A6NFN3 312 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 ZNF850A8MQ14 1090 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 C8orf87E5RJ46 101 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 LINC01619G3V211 115 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 GYG2O15488 501 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 MGRN1O60291 552 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 CRLF1O75462 422 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 SCRG1O75711 98 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 PIAS1O75925 651 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 YIF1AO95070 293 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 C1QBP02746 253 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 EIF4EP06730 217 aaKnown RBP3.27□□□□□ -1.89
VPS41-212ENST00000482217 IL3P08700 152 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 RBMY1DP0C7P1 496 aaKnown RBP3.27□□□□□ -1.89
VPS41-212ENST00000482217 RBMY1A1P0DJD3 496 aaKnown RBP3.27□□□□□ -1.89
VPS41-212ENST00000482217 SULT1A3P0DMM9 295 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 SULT1A4P0DMN0 295 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 IGKV1-13P0DP09 117 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 CA6P23280 308 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 PHBP35232 272 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 MYCNOSP40205 109 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 PPICP45877 212 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 VEGFCP49767 419 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 DEFA1P59665 94 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 KRTAP10-9P60411 292 aa3.27□□□□□ -1.89
VPS41-212ENST00000482217 HSPE1P61604 102 aaKnown RBP3.27□□□□□ -1.89
VPS41-212ENST00000482217 SELENOTP62341 195 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms