RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 HAND1O96004 215 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 DBTP11182 482 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 PIPP12273 146 aaPredicted RBP7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 BCL3P20749 454 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 AZGP1P25311 298 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 PAX6P26367 422 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 GABRA5P31644 462 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 OR3A1P47881 315 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 BMXP51813 675 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 ACTA2P62736 377 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 ACTG2P63267 376 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 MRPL28Q13084 256 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 CCBE1Q6UXH8 406 aaPredicted RBP7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 GDPD3Q7L5L3 318 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 LHFPL4Q7Z7J7 247 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 PARP16Q8N5Y8 322 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 DTX3Q8N9I9 347 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 ASCC1Q8N9N2 400 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 Q8NFD4 153 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 OR4S1Q8NGB4 309 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 OR13D1Q8NGV5 346 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 RPS4Y2Q8TD47 263 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 OPALINQ96PE5 141 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 JAM3Q9BX67 310 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 COMMD4Q9H0A8 199 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 ISG20L2Q9H9L3 353 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 TCF7L1Q9HCS4 588 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 ERVK13-1Q9NX77 482 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 BLOC1S6Q9UL45 172 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 NOTCH3Q9UM47 2321 aa7.85□□□□□ -1.15
TMEM39A-207ENST00000482162 KIAA2026Q5HYC2 2103 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 A0A0G2JK05 382 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 J3QLW9 94 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 TSPAN15O95858 294 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 FADS2O95864 444 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 CSN2P05814 226 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 HTR1AP08908 422 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 GNAO1P09471 354 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 LIMS3P0CW19 117 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 LIMS4P0CW20 117 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 CGB3P0DN86 165 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 CGB7P0DN87 165 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 ZNF19P17023 458 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 COX7A1P24310 79 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 DUSP1P28562 367 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 CD34P28906 385 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 P2RX3P56373 397 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 LGALS4P56470 323 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 ZP1P60852 638 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 DEFA6Q01524 100 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 RAB40BQ12829 278 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 PDLIM3Q53GG5 364 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 MINOS1Q5TGZ0 78 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 Q6P435 159 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 ZNF782Q6ZMW2 699 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 LHFPL3Q86UP9 236 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 APH1BQ8WW43 257 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 EMG1Q92979 244 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 FOXRED1Q96CU9 486 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 C4orf36Q96KX1 117 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 ZNF714Q96N38 554 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 NR1H4Q96RI1 486 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 MYCBPQ99417 103 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 ALG8Q9BVK2 526 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 YTHDF1Q9BYJ9 559 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 NCOR1P1Q9H4R4 102 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 ZCCHC4Q9H5U6 513 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 LINC00574Q9H8X3 128 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 FGF20Q9NP95 211 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 SERTAD4Q9NUC0 356 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 TCF19Q9Y242 345 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 SIGLEC9Q9Y336 463 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 UBE2J1Q9Y385 318 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 SESN1Q9Y6P5 492 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 MINOS1-NBL1R4GNA1 71 aa7.84□□□□□ -1.15
TMEM39A-207ENST00000482162 A0A087X0M5 115 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 A0A1B0GX30 115 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 TMEM212A6NML5 194 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 SH2D1BO14796 132 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 WBP4O75554 376 aaKnown RBP7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 MMP23AO75900 390 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 CLIC3O95833 236 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 OR2H2O95918 312 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 CYB5AP00167 134 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 IGLV1-47P01700 117 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 ARG1P05089 322 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 ZNF20P17024 532 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 EDDM3BP56851 147 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 PAX5Q02548 391 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 HERPUD1Q15011 391 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 CDK5R1Q15078 307 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 GRK1Q15835 563 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 SSX2Q16385 188 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 LY6EQ16553 131 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 RBM48Q5RL73 367 aaKnown RBP7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 ELP2Q6IA86 826 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 HEPN1Q6WQI6 88 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 ASCL4Q6XD76 172 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 SERPINA12Q8IW75 414 aa7.83□□□□□ -1.16
TMEM39A-207ENST00000482162 OR52I1Q8NGK6 324 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms