RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 CRIP3Q6Q6R5 217 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 DHRSXQ8N5I4 330 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 OR4S1Q8NGB4 309 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 OR11H6Q8NGC7 330 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 OR5D18Q8NGL1 313 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 CNIH3Q8TBE1 160 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 GPR148Q8TDV2 347 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 FOXRED1Q96CU9 486 aaPredicted RBP12.2□□□□□ -0.46
TDP2-205ENST00000480495 CITED1Q99966 193 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 RAB18Q9NP72 206 aa12.2□□□□□ -0.46
TDP2-205ENST00000480495 DIMT1Q9UNQ2 313 aaKnown RBP12.2□□□□□ -0.46
TDP2-205ENST00000480495 EXOSC1Q9Y3B2 195 aaKnown RBP12.2□□□□□ -0.46
TDP2-205ENST00000480495 ODF3BA8MYP8 253 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 SIRPB1O00241 398 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 MAGEB3O15480 346 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 CLIC3O95833 236 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 OR2H2O95918 312 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 ARG1P05089 322 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 CD2P06729 351 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 TMEM225BP0DP42 221 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 CALCBP10092 127 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 MYL12AP19105 171 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 RAB3AP20336 220 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 LMO1P25800 156 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 ETV1P50549 477 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 GTF2A1P52655 376 aaPredicted RBP12.19□□□□□ -0.46
TDP2-205ENST00000480495 P2RX3P56373 397 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 ZP1P60852 638 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 ADARB1P78563 741 aaKnown RBP12.19□□□□□ -0.46
TDP2-205ENST00000480495 MED21Q13503 144 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 CDK5R1Q15078 307 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 RCN1Q15293 331 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 ZNF626Q68DY1 528 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 ZNF529Q6P280 563 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 LIAT1Q6ZQX7 453 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 TCF23Q7RTU1 214 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 RNF144BQ7Z419 303 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 CHST4Q8NCG5 386 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 RPS4Y2Q8TD47 263 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 PPA2Q9H2U2 334 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 UBE2J1Q9Y385 318 aaPredicted RBP12.19□□□□□ -0.46
TDP2-205ENST00000480495 SESN1Q9Y6P5 492 aa12.19□□□□□ -0.46
TDP2-205ENST00000480495 MGAM2Q2M2H8 2515 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 MEX3AA1L020 520 aaKnown RBP12.18□□□□□ -0.46
TDP2-205ENST00000480495 VGLL3A8MV65 326 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 SRSF4Q08170 494 aaKnown RBP12.18□□□□□ -0.46
TDP2-205ENST00000480495 TREML4Q6UXN2 200 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 TPRX1Q8N7U7 411 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 DTX3Q8N9I9 347 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 PXT1Q8NFP0 134 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 RGP1Q92546 391 aaPredicted RBP12.18□□□□□ -0.46
TDP2-205ENST00000480495 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 CHCHD3Q9NX63 227 aaKnown RBP12.18□□□□□ -0.46
TDP2-205ENST00000480495 BABAM2Q9NXR7 383 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 HSPE1-MOB4S4R3N1 261 aa12.18□□□□□ -0.46
TDP2-205ENST00000480495 TRGV10A0A0A0MS01 117 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 A0A0G2JK05 382 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 TIMM23O14925 209 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 OGG1O15527 345 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 CSN2P05814 226 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 ZNF44P15621 663 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 SOX2P48431 317 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 MTNR1BP49286 362 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 LY6EQ16553 131 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 MINOS1Q5TGZ0 78 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 OR2G6Q5TZ20 316 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 ELP2Q6IA86 826 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 SLC35E4Q6ICL7 350 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 Q6P435 159 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 LHFPL4Q7Z7J7 247 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 TRAPPC6BQ86SZ2 158 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 OR52N1Q8NH53 320 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 CORO2AQ92828 525 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 TMEM80Q96HE8 168 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 GPER1Q99527 375 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 CDCA4Q9BXL8 241 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 GAL3ST2Q9H3Q3 398 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 TAS2R3Q9NYW6 316 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 FBLN5Q9UBX5 448 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 MINOS1-NBL1R4GNA1 71 aa12.17□□□□□ -0.46
TDP2-205ENST00000480495 CASQ2O14958 399 aaPredicted RBP12.16□□□□□ -0.46
TDP2-205ENST00000480495 DEGS1O15121 323 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 ALDOBP05062 364 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 PAX6P26367 422 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 GABRA5P31644 462 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 CAPGP40121 348 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 SCN1BQ07699 218 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 DYNC1I2Q13409 638 aaKnown RBP12.16□□□□□ -0.46
TDP2-205ENST00000480495 OGFRL1Q5TC84 451 aaPredicted RBP12.16□□□□□ -0.46
TDP2-205ENST00000480495 XAF1Q6GPH4 301 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 OR52W1Q6IF63 320 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 C8orf59Q8N0T1 100 aaPredicted RBP12.16□□□□□ -0.46
TDP2-205ENST00000480495 OR4C13Q8NGP0 309 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 PIFOQ8TCI5 191 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 TMEM106AQ96A25 262 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 SMIM19Q96E16 107 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 CLEC7AQ9BXN2 247 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 TMEM133Q9H2Q1 129 aa12.16□□□□□ -0.46
TDP2-205ENST00000480495 RANBP3Q9H6Z4 567 aaPredicted RBP12.16□□□□□ -0.46
TDP2-205ENST00000480495 ABCB10Q9NRK6 738 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms