RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 PEX16Q9Y5Y5 336 aa4.35□□□□□ -1.71
COMMD3-212ENST00000479958 V9GYH0 126 aa4.35□□□□□ -1.71
COMMD3-212ENST00000479958 IGF2RP11717 2491 aa4.35□□□□□ -1.71
COMMD3-212ENST00000479958 PIEZO2Q9H5I5 2752 aa4.35□□□□□ -1.71
COMMD3-212ENST00000479958 SVILO95425 2214 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ACACAQ13085 2346 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 LINC00854A0A1B0GVQ3 168 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 LOC107986453A0A1B0GWG9 222 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 TMEM212A6NML5 194 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 LOC110117498-PIK3R3F6TDL0 507 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 GPR171O14626 319 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ZNF254O75437 659 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 GATBO75879 557 aaKnown RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ACTL6AO96019 429 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 SERPINA3P01011 423 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 TTRP02766 147 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 MAS1P04201 325 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 YES1P07947 543 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ACSM4P0C7M7 580 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 OCM2P0CE71 109 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 CPN1P15169 458 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ZNF24P17028 368 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 RAB3BP20337 219 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 MSR1P21757 451 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 MYL9P24844 172 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 CAPZA2P47755 286 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 CX3CR1P49238 355 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 PPP5CP53041 499 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ZNF121P58317 390 aaPredicted RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 LSM6P62312 80 aaKnown RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 HIST1H3AP68431 136 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 P2RY14Q15391 338 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 TRAM1Q15629 374 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ZNF79Q15937 498 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 Q499Y3 187 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 YIF1BQ5BJH7 314 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 BCL2L15Q5TBC7 163 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 HIST2H3PS2Q5TEC6 136 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 FAM27BQ5VT28 67 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 SFXN4Q6P4A7 337 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 C16orf87Q6PH81 154 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 CNIH2Q6PI25 160 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 STAC2Q6ZMT1 411 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 HIST2H3AQ71DI3 136 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 HDDC2Q7Z4H3 204 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 BIVMQ86UB2 503 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ELMOD2Q8IZ81 293 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ZADH2Q8N4Q0 377 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 ZNF433Q8N7K0 673 aaPredicted RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 NUP37Q8NFH4 326 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 OR4M1Q8NGD0 313 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 OR8B12Q8NGG6 310 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 OR51A2Q8NGJ7 313 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 OR51E1Q8TCB6 317 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 TSEN15Q8WW01 171 aaKnown RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 S100ZQ8WXG8 99 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 TMEM45BQ96B21 275 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 FGGYQ96C11 551 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 CYYR1Q96J86 154 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 SOSTQ9BQB4 213 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 PRRG4Q9BZD6 226 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 PBOV1Q9GZY1 135 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 C1orf198Q9H425 327 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 HMG20AQ9NP66 347 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 TAS2R4Q9NYW5 299 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 CLCF1Q9UBD9 225 aa4.34□□□□□ -1.71
COMMD3-212ENST00000479958 CRNNQ9UBG3 495 aaPredicted RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 MCTS1Q9ULC4 181 aaKnown RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 NOSIPQ9Y314 301 aaKnown RBP4.34□□□□□ -1.71
COMMD3-212ENST00000479958 LAMA5O15230 3695 aa4.34□□□□□ -1.72
COMMD3-212ENST00000479958 SLC22A20A6NK97 555 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 ZNF724A8MTY0 619 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 F5H5K5 113 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 LANCL1O43813 399 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 MRPL33O75394 65 aaKnown RBP4.33□□□□□ -1.72
COMMD3-212ENST00000479958 HLA-HP01893 362 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 CST2P09228 141 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 ZNF32P17041 273 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 IGFBP3P17936 291 aaPredicted RBP4.33□□□□□ -1.72
COMMD3-212ENST00000479958 ACHEP22303 614 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 AGTR1P30556 359 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 S100A5P33763 92 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 ETV6P41212 452 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 EVX1P49640 407 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 PSMD7P51665 324 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 EFNB2P52799 333 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 SH3BGRP55822 239 aaPredicted RBP4.33□□□□□ -1.72
COMMD3-212ENST00000479958 PSG4Q00888 419 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 MRPL28Q13084 256 aaKnown RBP4.33□□□□□ -1.72
COMMD3-212ENST00000479958 RIGQ13278 110 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 TSC22D1Q15714 1073 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 TAB1Q15750 504 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 TEX38Q6PEX7 206 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 DEGS2Q6QHC5 323 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 METAP1DQ6UB28 335 aaPredicted RBP4.33□□□□□ -1.72
COMMD3-212ENST00000479958 IGFL3Q6UXB1 125 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 PAMR1Q6UXH9 720 aa4.33□□□□□ -1.72
COMMD3-212ENST00000479958 Q6ZS92 163 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms