RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 OR51D1Q8NGF3 324 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 TBC1D15Q8TC07 691 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 DACT3Q96B18 629 aaPredicted RBP13.14□□□□□ -0.31
COPS3-207ENST00000477299 TMEM186Q96B77 213 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 FOXRED1Q96CU9 486 aaPredicted RBP13.14□□□□□ -0.31
COPS3-207ENST00000477299 MED30Q96HR3 178 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 DNTTIP1Q9H147 329 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 SLC25A10Q9UBX3 287 aaPredicted RBP13.14□□□□□ -0.31
COPS3-207ENST00000477299 ST3GAL6Q9Y274 331 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 FOXH1O75593 365 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 CRTAPO75718 401 aaPredicted RBP13.13□□□□□ -0.31
COPS3-207ENST00000477299 CSTBP04080 98 aaKnown RBP13.13□□□□□ -0.31
COPS3-207ENST00000477299 CHRM2P08172 466 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 MGMTP16455 207 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 RPS19P39019 145 aaKnown RBP13.13□□□□□ -0.31
COPS3-207ENST00000477299 CAPZA1P52907 286 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 RBM11P57052 281 aaKnown RBP13.13□□□□□ -0.31
COPS3-207ENST00000477299 RAB11BQ15907 218 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 TAF9Q16594 264 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 CTF1Q16619 201 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 C2orf76Q3KRA6 126 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 SPIN3Q5JUX0 258 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 GPR141Q7Z602 305 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 TPRX1Q8N7U7 411 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 OR4M1Q8NGD0 313 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 OR6M1Q8NGM8 313 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 H1FXQ92522 213 aaKnown RBP13.13□□□□□ -0.31
COPS3-207ENST00000477299 SELENOIQ9C0D9 397 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 ING3Q9NXR8 418 aa13.13□□□□□ -0.31
COPS3-207ENST00000477299 POLR3KQ9Y2Y1 108 aaPredicted RBP13.13□□□□□ -0.31
COPS3-207ENST00000477299 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 A0A0A6YYD4 124 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 TRAV24A0A0B4J272 114 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 IFITM5A6NNB3 132 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 K7N7A8 449 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 SLC33A1O00400 549 aaPredicted RBP13.12□□□□□ -0.31
COPS3-207ENST00000477299 HSPB6O14558 160 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 PDCD5O14737 125 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 SH2D1BO14796 132 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 DEGS1O15121 323 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 MPIG6BO95866 241 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 TK1P04183 234 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 ZNF44P15621 663 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 RPL5P46777 297 aaKnown RBP13.12□□□□□ -0.31
COPS3-207ENST00000477299 OR3A1P47881 315 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 EFNB2P52799 333 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 PRB3Q04118 309 aaPredicted RBP13.12□□□□□ -0.31
COPS3-207ENST00000477299 SIGIRRQ6IA17 410 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 GDPGP1Q6ZNW5 385 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 C1orf229Q6ZS94 237 aaPredicted RBP13.12□□□□□ -0.31
COPS3-207ENST00000477299 IL17RELQ6ZVW7 336 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 ANKRD13BQ86YJ7 626 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 BPIFB2Q8N4F0 458 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 ZNF561Q8N587 486 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 FAM3DQ96BQ1 224 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 NICN1Q9BSH3 213 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 DCTN5Q9BTE1 182 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 PPA2Q9H2U2 334 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 C19orf12Q9NSK7 152 aa13.12□□□□□ -0.31
COPS3-207ENST00000477299 IGHV2-70DA0A0C4DH43 119 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 TMEM272A0A1B0GTI8 110 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 TMEM14DPA8MWL7 114 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 LDLRAD4O15165 306 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 GTF2F2P13984 249 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 GABRR1P24046 479 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 LMO1P25800 156 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
COPS3-207ENST00000477299 DLX1P56177 255 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 ERVFRD-1P60508 538 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 FAHD2BQ6P2I3 314 aaPredicted RBP13.11□□□□□ -0.31
COPS3-207ENST00000477299 GLCCI1Q86VQ1 547 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 CLVS1Q8IUQ0 354 aaPredicted RBP13.11□□□□□ -0.31
COPS3-207ENST00000477299 RAB40AQ8WXH6 277 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 FAHD2AQ96GK7 314 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 SNX22Q96L94 193 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 Q96M66 194 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 NUDT16L1Q9BRJ7 211 aaKnown RBP13.11□□□□□ -0.31
COPS3-207ENST00000477299 TMPRSS13Q9BYE2 586 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
COPS3-207ENST00000477299 RHOFQ9HBH0 211 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 STEAP1Q9UHE8 339 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 SCOCQ9UIL1 159 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 RPUSD1Q9UJJ7 312 aaKnown RBP13.11□□□□□ -0.31
COPS3-207ENST00000477299 INSIG2Q9Y5U4 225 aa13.11□□□□□ -0.31
COPS3-207ENST00000477299 FN1P02751 2386 aaKnown RBP13.11□□□□□ -0.31
COPS3-207ENST00000477299 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 KIR2DS1A0A191URI9 304 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 INAFM1C9JVW0 142 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 ZNF780AO75290 641 aaPredicted RBP13.1□□□□□ -0.31
COPS3-207ENST00000477299 BPNT1O95861 308 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 ARSBP15848 533 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 SERPINB10P48595 397 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 NPY4RP50391 375 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 IL13RA2Q14627 380 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 GRK1Q15835 563 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 CR1LQ2VPA4 569 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 TIMM50Q3ZCQ8 353 aa13.1□□□□□ -0.31
COPS3-207ENST00000477299 FIP1L1Q6UN15 594 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms