RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 BLMHQ13867 455 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 LRRC10Q5BKY1 277 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 ATPAF1Q5TC12 328 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-218ENST00000475657 HCP5Q6MZN7 132 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 OR8B12Q8NGG6 310 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 OR5D13Q8NGL4 314 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 REEP6Q96HR9 211 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 PGLYRP3Q96LB9 341 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 PRSS22Q9GZN4 317 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 COMMD4Q9H0A8 199 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 RGCCQ9H4X1 137 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 OPA3Q9H6K4 179 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 C14orf119Q9NWQ9 140 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 SIRT4Q9Y6E7 314 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-218ENST00000475657 DNAH7Q8WXX0 4024 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 VGLL3A8MV65 326 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 CCRL2O00421 344 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 IGLV3-1P01715 115 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 ISG15P05161 165 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 CFL1P23528 166 aaKnown RBP11.25□□□□□ -0.61
FAM3A-218ENST00000475657 PSMA1P25786 263 aaKnown RBP11.25□□□□□ -0.61
FAM3A-218ENST00000475657 HOXD3P31249 432 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-218ENST00000475657 BMXP51813 675 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 IKZF1Q13422 519 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 TMEM244Q5VVB8 128 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 LIPKQ5VXJ0 399 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 FAM216BQ8N7L0 139 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 ZNF676Q8N7Q3 588 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 ZFP41Q8N8Y5 198 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 CCDC54Q8NEL0 328 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 OR1M1Q8NGA1 313 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 OR5AK2Q8NH90 309 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 ITFG2Q969R8 447 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 DNTTIP1Q9H147 329 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 SNTG1Q9NSN8 517 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 NDUFB11Q9NX14 153 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 ZMAT5Q9UDW3 170 aaKnown RBP11.25□□□□□ -0.61
FAM3A-218ENST00000475657 SLC22A13Q9Y226 551 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 RHBDD3Q9Y3P4 386 aa11.25□□□□□ -0.61
FAM3A-218ENST00000475657 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 CDIPTO14735 213 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 ANGPTL7O43827 346 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 ALDOBP05062 364 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 SELLP14151 372 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 AMY2BP19961 511 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 CCL1P22362 96 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 LMO1P25800 156 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 GSK3AP49840 483 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 CNN3Q15417 329 aaKnown RBP11.24□□□□□ -0.61
FAM3A-218ENST00000475657 TRAM1Q15629 374 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 SSX1Q16384 188 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 YIF1BQ5BJH7 314 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 WDR82Q6UXN9 313 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 MS4A15Q8N5U1 240 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 OR13F1Q8NGS4 319 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 THRSPQ92748 146 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 GHSRQ92847 366 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 SPSB4Q96A44 273 aa11.24□□□□□ -0.61
FAM3A-218ENST00000475657 PAPOLGQ9BWT3 736 aaKnown RBP11.24□□□□□ -0.61
FAM3A-218ENST00000475657 PNMA8CA0A1B0GUJ8 204 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 LOC107986453A0A1B0GWG9 222 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.23□□□□□ -0.61
FAM3A-218ENST00000475657 DMRTC1Q5HYR2 192 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 GPR141Q7Z602 305 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 OR5AU1Q8NGC0 362 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 OR51E1Q8TCB6 317 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 GPR148Q8TDV2 347 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 H1FXQ92522 213 aaKnown RBP11.23□□□□□ -0.61
FAM3A-218ENST00000475657 RPL3LQ92901 407 aaKnown RBP11.23□□□□□ -0.61
FAM3A-218ENST00000475657 PDCD1LG2Q9BQ51 273 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 WDR13Q9H1Z4 485 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 GPR84Q9NQS5 396 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 HHLA2Q9UM44 414 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 TCF19Q9Y242 345 aa11.23□□□□□ -0.61
FAM3A-218ENST00000475657 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
FAM3A-218ENST00000475657 A0A1B0GTI1 187 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 hCG_38984A0A1B0GV85 526 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 DHRS7CA6NNS2 312 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 ZNF850A8MQ14 1090 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 F2RL2O00254 374 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 SYT7O43581 403 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 MTRF1O75570 445 aaKnown RBP11.22□□□□□ -0.61
FAM3A-218ENST00000475657 SERPINA3P01011 423 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 CD36P16671 472 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 GALP22466 123 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 GNALP38405 381 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 DDOSTP39656 456 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 CAV3P56539 151 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 TIMM50Q3ZCQ8 353 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 NKAPLQ5M9Q1 402 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 STUMQ69YW2 141 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 Q6ZSR3 168 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 COMMD2Q86X83 199 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 RGP1Q92546 391 aaPredicted RBP11.22□□□□□ -0.61
FAM3A-218ENST00000475657 FGF23Q9GZV9 251 aaPredicted RBP11.22□□□□□ -0.61
FAM3A-218ENST00000475657 PITPNC1Q9UKF7 332 aa11.22□□□□□ -0.61
FAM3A-218ENST00000475657 TRBV23-1A0A0A0MS06 115 aa11.21□□□□□ -0.61
FAM3A-218ENST00000475657 TRBV5-5A0A0J9YX44 114 aa11.21□□□□□ -0.61
FAM3A-218ENST00000475657 A0A1W2PQ09 198 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms