RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CDC42BPGQ6DT37 1551 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ARAP2Q8WZ64 1704 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 RAPGEF6Q8TEU7 1601 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 B4DEV8 164 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 H3BMH7 237 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CCDC179H3BU77 68 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SIRPB1O00241 398 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 TM4SF5O14894 197 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CRLF1O75462 422 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CDRT1O95170 752 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CATP04040 527 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 SP1P08047 785 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 GKN3PP0CG01 181 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 LINC00694P0DN24 101 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CDKN2AP42771 156 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 NKX2-1P43699 371 aaPredicted RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 CDK3Q00526 305 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 EXOSC7Q15024 291 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 ARSIQ5FYB1 569 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 GRHL2Q6ISB3 625 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 UFSP1Q6NVU6 142 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ANKRD16Q6P6B7 361 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 FOXI2Q6ZQN5 318 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 OR2AJ1Q8NGZ0 328 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 THEM6Q8WUY1 208 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 TMEM133Q9H2Q1 129 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 DLL4Q9NR61 685 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SERTAD4Q9NUC0 356 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 MRPS17Q9Y2R5 130 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 EFCAB5A4FU69 1503 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 MYO10Q9HD67 2058 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 A0A0G2JMM0 328 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 LOC102725191A0A1B0GVB3 256 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 A0A1B0GX51 115 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 A0A1W2PPB8 328 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ODAMA1E959 279 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 FAM231BA6NCW3 169 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 KIR3DP1A8MWS1 328 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 H2AFZP0C0S5 128 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SULT1A3P0DMM9 295 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SULT1A4P0DMN0 295 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 LEPP41159 167 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CLDN6P56747 220 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 RPS28P62857 69 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 C1orf195Q5TG92 126 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 FAM90A2PQ658T7 463 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ZNF660Q6AZW8 331 aaPredicted RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 TBPL2Q6SJ96 375 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 EPGNQ6UW88 154 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 C6orf120Q7Z4R8 191 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SAXO1Q8IYX7 474 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 DDIT4LQ96D03 193 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 C20orf173Q96LM9 149 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 TEX101Q9BY14 249 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SLC17A9Q9BYT1 436 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SLC25A39Q9BZJ4 359 aaPredicted RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 PRORYQ9H606 182 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 HDGFL3Q9Y3E1 203 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 UNC13BO14795 1591 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 CHD2O14647 1828 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 DHRS12A0PJE2 317 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 LILRA5A6NI73 299 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 INMT-MINDY4F8WBC2 141 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 GAPDHSO14556 408 aaPredicted RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 ZNF195O14628 629 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SH2D1BO14796 132 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 FAM189A1O60320 539 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 MPDU1O75352 247 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 FAM157CP0CG43 387 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ZNF728P0DKX0 622 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 VPREB1P12018 145 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ATP6V0CP27449 155 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 HTR1DP28221 377 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 HILS1P60008 231 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 RPS27AP62979 156 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 UBA52P62987 128 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 IL10RBQ08334 325 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 LY6DQ14210 128 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 TRIP6Q15654 476 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 GLYATL3Q5SZD4 288 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 OR4N5Q8IXE1 308 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 TMEM130Q8N3G9 435 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 FTMTQ8N4E7 242 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SYT8Q8NBV8 401 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 OR52E2Q8NGJ4 325 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 RASL10AQ92737 203 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 TSPAN32Q96QS1 320 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 GABRG3Q99928 467 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 MACROD1Q9BQ69 325 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 VKORC1Q9BQB6 163 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 FGFBP2Q9BYJ0 223 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 UGGT1Q9NYU2 1555 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 ATP7BP35670 1465 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 NUP153P49790 1475 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 C7orf66A4D0T2 115 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 SRRM4A7MD48 611 aaKnown RBP2.98□□□□□ -1.93
UBR3-208ENST00000474426 C9JAW5 83 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 E7EQ34 232 aa2.98□□□□□ -1.93
UBR3-208ENST00000474426 MLNRO43193 412 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms