RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 GLT8D1Q68CQ7 371 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 C22orf42Q6IC83 251 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 SLC36A1Q7Z2H8 476 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 ISOC1Q96CN7 298 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 RPUSD1Q9UJJ7 312 aaKnown RBP10.82□□□□□ -0.68
TPM3-216ENST00000473036 CEPT1Q9Y6K0 416 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 TENM1Q9UKZ4 2725 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 TMEM82A0PJX8 343 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 A6NHS1 94 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 ZNF737O75373 536 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 KDM4BO94953 1096 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 KNG1P01042 644 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 HCKP08631 526 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 IGHV4-38-2P0DP08 117 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 BDKRB2P30411 391 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 OR3A4PP47883 348 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 DLX1P56177 255 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 IL13RA1P78552 427 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
TPM3-216ENST00000473036 CTF1Q16619 201 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 TUSC1Q2TAM9 212 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 PNLDC1Q8NA58 520 aaKnown RBP10.81□□□□□ -0.68
TPM3-216ENST00000473036 TBX15Q96SF7 602 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 UQCC2Q9BRT2 126 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 DCTN5Q9BTE1 182 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 ZNF581Q9P0T4 197 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 SLC25A10Q9UBX3 287 aaPredicted RBP10.81□□□□□ -0.68
TPM3-216ENST00000473036 OR14J1Q9UGF5 321 aa10.81□□□□□ -0.68
TPM3-216ENST00000473036 IGHV3OR16-10A0A075B7F0 116 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 WIPF1O43516 503 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 NDUFB3O43676 98 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 CYB5AP00167 134 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 RAB3BP20337 219 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 SNU13P55769 128 aaKnown RBP10.8□□□□□ -0.68
TPM3-216ENST00000473036 FGF12P61328 243 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 COL10A1Q03692 680 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 PRB3Q04118 309 aaPredicted RBP10.8□□□□□ -0.68
TPM3-216ENST00000473036 SCGB2A2Q13296 93 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 FAM189A2Q15884 450 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 ASCL4Q6XD76 172 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 C17orf107Q6ZR85 190 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 SLC16A12Q6ZSM3 486 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 MKXQ8IYA7 352 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 BCL6BQ8N143 479 aaPredicted RBP10.8□□□□□ -0.68
TPM3-216ENST00000473036 FAM58AQ8N1B3 248 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 Q8N7P7 452 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 C8orf46Q8TAG6 207 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 AP3S1Q92572 193 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 EMG1Q92979 244 aaKnown RBP10.8□□□□□ -0.68
TPM3-216ENST00000473036 CYYR1Q96J86 154 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 CENPOQ9BU64 300 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 SIRPDQ9H106 197 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 RHOFQ9HBH0 211 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 HMG20AQ9NP66 347 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 GHRLQ9UBU3 117 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 AUP1Q9Y679 476 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 MGAM2Q2M2H8 2515 aa10.8□□□□□ -0.68
TPM3-216ENST00000473036 A0A1W2PP11 408 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 NKX6-3A6NJ46 265 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 ENSAO43768 121 aaKnown RBP10.79□□□□□ -0.68
TPM3-216ENST00000473036 PSPNO60542 156 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 CDRT1O95170 752 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 PRKACAP17612 351 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 SERPINB10P48595 397 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 RORCP51449 518 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 CAV3P56539 151 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 SCAND1P57086 179 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 ARF6P62330 175 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 DYNC1I2Q13409 638 aaKnown RBP10.79□□□□□ -0.68
TPM3-216ENST00000473036 ZNF146Q15072 292 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 PDCD1Q15116 288 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 LRRC10Q5BKY1 277 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 DDI2Q5TDH0 399 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 Q6P435 159 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 C12orf54Q6X4T0 127 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 LRRTM1Q86UE6 522 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 SAXO1Q8IYX7 474 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 ZSCAN4Q8NAM6 433 aaPredicted RBP10.79□□□□□ -0.68
TPM3-216ENST00000473036 TMEM185AQ8NFB2 350 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 OR10K1Q8NGX5 313 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 SGMS2Q8NHU3 365 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 UPRTQ96BW1 309 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 KCTD12Q96CX2 325 aaKnown RBP10.79□□□□□ -0.68
TPM3-216ENST00000473036 MED30Q96HR3 178 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 C1orf147Q96MC9 270 aaPredicted RBP10.79□□□□□ -0.68
TPM3-216ENST00000473036 S100A13Q99584 98 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 GFI1Q99684 422 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 RBM38Q9H0Z9 239 aaKnown RBP10.79□□□□□ -0.68
TPM3-216ENST00000473036 C19orf12Q9NSK7 152 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 V9GY05 133 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 KIAA2026Q5HYC2 2103 aa10.79□□□□□ -0.68
TPM3-216ENST00000473036 NOTOA8MTQ0 251 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 H3BMQ9 156 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 K7N7A8 449 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 ZNF780AO75290 641 aaPredicted RBP10.78□□□□□ -0.68
TPM3-216ENST00000473036 ECDO95905 644 aaPredicted RBP10.78□□□□□ -0.68
TPM3-216ENST00000473036 HAND1O96004 215 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 TK1P04183 234 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 UBBP0CG47 229 aa10.78□□□□□ -0.68
TPM3-216ENST00000473036 TMEM225BP0DP42 221 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms