RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LYRM1O43325 122 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 ORC5O43913 435 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 SC5DO75845 299 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 DHRS3O75911 302 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 IGHV1-69P01742 117 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 MRPL3P09001 348 aaKnown RBP11.13□□□□□ -0.63
HMGN1-211ENST00000471260 AMY2BP19961 511 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 INPP1P49441 399 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 GUCA2AQ02747 115 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 ZNF788Q6ZQV5 615 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 C1orf122Q6ZSJ8 110 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 COMMD2Q86X83 199 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 KIR3DL3Q8N743 410 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 OR51G2Q8NGK0 314 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 ANGPTL6Q8NI99 470 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 GRPEL2Q8TAA5 225 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 SSMEM1Q8WWF3 244 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 CREB3L1Q96BA8 519 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 C7orf50Q9BRJ6 194 aaKnown RBP11.13□□□□□ -0.63
HMGN1-211ENST00000471260 DCTN5Q9BTE1 182 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 TMED9Q9BVK6 235 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 SLITRK2Q9H156 845 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 OR51I2Q9H344 312 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 SLA2Q9H6Q3 261 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 GPR84Q9NQS5 396 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 IKZF2Q9UKS7 526 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 COPS3Q9UNS2 423 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 SOX21Q9Y651 276 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-211ENST00000471260 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 MDFIC2A0A1B0GVS7 189 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 DHRS7CA6NNS2 312 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 ZNF732B4DXR9 585 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 PSMD9O00233 223 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 SIGLEC5O15389 551 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 PLA2G10O15496 165 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 AKR7A2O43488 359 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 SPRY1O43609 319 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-211ENST00000471260 HPGDSO60760 199 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 GATBO75879 557 aaKnown RBP11.12□□□□□ -0.63
HMGN1-211ENST00000471260 ARL6IP5O75915 188 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 APOL3O95236 402 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 CRYBA1P05813 215 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 ACAA1P09110 424 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-211ENST00000471260 GLRA1P23415 457 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 ERP29P30040 261 aaKnown RBP11.12□□□□□ -0.63
HMGN1-211ENST00000471260 GPM6AP51674 278 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 CAV3P56539 151 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 MRPL28Q13084 256 aaKnown RBP11.12□□□□□ -0.63
HMGN1-211ENST00000471260 IL18Q14116 193 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 RUSC1-AS1Q66K80 236 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 PYHIN1Q6K0P9 492 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 TMEM91Q6ZNR0 172 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 SLC35F2Q8IXU6 374 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 FAM216BQ8N7L0 139 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 OR51E1Q8TCB6 317 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 LHX4Q969G2 390 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 SEH1LQ96EE3 360 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 NEDD4LQ96PU5 975 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 MARVELD1Q9BSK0 173 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 FGF23Q9GZV9 251 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-211ENST00000471260 WDR13Q9H1Z4 485 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 UNKLQ9H9P5 680 aaKnown RBP11.12□□□□□ -0.63
HMGN1-211ENST00000471260 ADGRL4Q9HBW9 690 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 RASL12Q9NYN1 266 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 COPZ2Q9P299 210 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 NLKQ9UBE8 527 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 COMMD3Q9UBI1 195 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 SLC25A10Q9UBX3 287 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-211ENST00000471260 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 TENM1Q9UKZ4 2725 aa11.12□□□□□ -0.63
HMGN1-211ENST00000471260 A0A1B0GW55 424 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 PRR32B1ATL7 298 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 SRSF10O75494 262 aaKnown RBP11.11□□□□□ -0.63
HMGN1-211ENST00000471260 NRASP01111 189 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 TTRP02766 147 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 MELTFP08582 738 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 OR2T7P0C7T2 308 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DUX4L2P0CJ85 424 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DUX4L3P0CJ86 424 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DUX4L4P0CJ87 422 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DUX4L5P0CJ88 424 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DUX4L6P0CJ89 424 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DUX4L7P0CJ90 424 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 MRPS15P82914 257 aaKnown RBP11.11□□□□□ -0.63
HMGN1-211ENST00000471260 IKZF1Q13422 519 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 CDK10Q15131 360 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 CCDC58Q4VC31 144 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 PRR31Q5SQ13 230 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DMKNQ6E0U4 476 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-211ENST00000471260 Q6ZSR3 168 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 VMO1Q7Z5L0 202 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 LDLRAD3Q86YD5 345 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 ELMOD2Q8IZ81 293 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 OR10H4Q8NGA5 316 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 OR5T2Q8NGG2 359 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 OR2T27Q8NH04 317 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 AQP3Q92482 292 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 TRIM63Q969Q1 353 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms